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Information on SUBCLASS 4.1.3
Subclass Accession number: 4772
Subclass: 4.1.3 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 11

Average sequence ID (%) : 17.8 +/- 17.6
Average RMSD (Å) : 0.864 +/- 0.298

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXGXhXXX
(φψ)-conformation: aalabpaa
Pattern: [aekqrst][aeknr][ailmvw]xx[EG][ekl][AGILV][DGNPS][adep]xx[aglv][adgkqrs]x
Conservation:0.010-0.614-0.221-0.330-0.5223.375-0.1600.5440.448-0.210-0.382-0.795-0.257-0.434-0.451
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ail_*_31ail   -2135QVVDQELGDAPFLDRHHHHTT---HHHHHHaaaaavaxxaaaaaa
1ewq_A_3321ewq   A337351TRLELGRASPKDLGAHHHHTT---HHHHHHaaaaavapxaaaaaa
1fuq_A_421fuq   A5872VNEDLGLLSEEKASAHHHHTTSS-HHHHHHaaaaavabxaaaaaa
1gxs_A_1931gxs   A203217SWWHHGLISDETRDSHHHHTT-S-HHHHHHaaaaavabxaaaaaa
1hzf_A_11431hzf   A11621176EKASAGLLGAHAAAIHHHHHT---HHHHHHaaaaavaxxaaaaaa
1j3u_A_431j3u   A5973ANMEVGLLDKEVGQYHHHHTT-S-HHHHHHaaaaavabpaaaaaa
1j97_A_321j97   A4054KEAMEGKLNFEQSLRHHHHTTSS-HHHHHHaaaaavabxaaaaaa
1o17_A_181o17   A2640KAIIRGEVPEILVSAHHHHTT-S-HHHHHHaaaaavabpaaaaaa
1ufa_A_4341ufa   A434448EAARRGVLPEGVLRQHHHHH--S-HHHHHHaaaaalaxwaaaaaa
1v8g_A_151v8g   A2337RALMAGEVSPVRAAGHHHHTT-S-HHHHHHaaaaavabxaaaaaa
1vdk_A_431vdk   A5973ANLELGELPEEIAKAHHHHTTSS-HHHHHHaaaaavabxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hzf_A_11431hzf   A     MSESELENOMETHIONINE L - 1169
1hzf_A_11431hzf   A     MSESELENOMETHIONINE G - 1170
1hzf_A_11431hzf   A     MSESELENOMETHIONINE A - 1171
1hzf_A_11431hzf   A     MSESELENOMETHIONINE A - 1174
1j97_A_321j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE M - 43
1j97_A_321j97   A     MGMAGNESIUM ION M - 43
1j97_A_321j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE F - 49
1ufa_A_4341ufa   A     MSESELENOMETHIONINE E - 434
1ufa_A_4341ufa   A     MSESELENOMETHIONINE A - 435
1ufa_A_4341ufa   A     MSESELENOMETHIONINE A - 436
1ufa_A_4341ufa   A     MSESELENOMETHIONINE R - 437
1ufa_A_4341ufa   A     MSESELENOMETHIONINE V - 445
1ufa_A_4341ufa   A     MSESELENOMETHIONINE L - 446
1ufa_A_4341ufa   A     MSESELENOMETHIONINE R - 447
1ufa_A_4341ufa   A     MSESELENOMETHIONINE Q - 448

Clusters included in this Subclass
CLUSTER: HH.4.80
CLUSTER: HH.5.48