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Information on SUBCLASS 4.1.4
Subclass Accession number: 4773
Subclass: 4.1.4 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 9.7 +/- 11.1
Average RMSD (Å) : 0.433 +/- 0.242

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XpcXhphX
(φψ)-conformation: aalabpaa
Pattern: x[gilvy][aklmt][ekrs][EGK]x[ilmv][DPST][almpy]x[aqt][GLVW]x
Conservation:-0.873-0.937-0.4880.0362.351-0.8300.9481.108-0.774-0.9480.438-0.2250.195
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e2r_B_1091e2r   B109121WGTSGELSAEQVDHHHHSSS-HHHHHaaaavabxaaaaa
1ezf_A_1771ezf   A187199FSASEFEDPLVGEHHHHTSS-HHHHHaaaavabpaaaaa
1lm5_A_26331lm5   A26362648GIERGIVDSITGQHHHTTSS-HHHHHaaaavabxaaaaa
1lm5_A_27091lm5   A27122724AVKEKWLPYEAGQHHHTTSS-HHHHHaaaavabxaaaaa
1p6x_A_1471p6x   A152164RYLLGDMSMCALMHHHTTSS-HHHHHaaaavabxaaaaa
1vj5_A_491vj5   A5264RLMKGEITLSQWIHHHHTSS-HHHHHaaaavabxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e2r_B_1091e2r   B     HECHEME C W - 109
1e2r_B_1091e2r   B     HECHEME C L - 115
1e2r_B_1091e2r   B     HECHEME C M - 123
1e2r_B_1091e2r   B     HECHEME C A - 124
1e2r_B_1091e2r   B     HECHEME C L - 127
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 177
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID V - 179
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID G - 180
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID I - 181
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID L - 183
1ezf_A_1771ezf   A     IN0N-{2-[TRANS-7-CHLORO-1-(2,2-DIMETHYL-PROPYL) -5-NAPHTHALEN-1-YL-2-OXO-1,2,3,5-TETRAHYDRO-BENZO[E] [1, 4]OXAZEPIN-3-YL]-ACETYL}-ASPARTIC ACID F - 187
1p6x_A_1471p6x   A     THMTHYMIDINE F - 148
1p6x_A_1471p6x   A     THMTHYMIDINE P - 149
1p6x_A_1471p6x   A     THMTHYMIDINE R - 152
1vj5_A_491vj5   A     PO4PHOSPHATE ION M - 54

Clusters included in this Subclass
CLUSTER: HH.3.312
CLUSTER: HH.4.127