Information on SUBCLASS 4.2.1 |
Subclass Accession number: 4777
Subclass: 4.2.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 33 Average sequence ID (%) : 17.5 +/- 17.4 Average RMSD (Å) : 0.452 +/- 0.217 Consensus geometry
|
Consensus Sequence: | pXpPppXX |
(φψ)-conformation: | aabaapaa |
Pattern: | x | [cfikltv] | [adeknqrs] | x | [adeknqr] | [apv] | [cdehknqrsty] | [dehnrswy] | x | x | [agilvy] | [dhkqrwy] | x |
Conservation: | -0.600 | 0.176 | 0.213 | -0.796 | 0.286 | 3.073 | -0.204 | 0.049 | -0.826 | -0.491 | 0.032 | -0.351 | -0.559 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a17_*_112 | 1a17 | - | 122 | 134 | VVKVKPHDKDAKM | HHHHSTT-HHHHH | aaaabaaxaaaaa |
1a17_*_44 | 1a17 | - | 54 | 66 | AIELNPSNAIYYG | HHHHSTT-HHHHH | aaaabaaxaaaaa |
1a17_*_78 | 1a17 | - | 88 | 100 | AIELDKKYIKGYY | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1ciy_*_90 | 1ciy | - | 116 | 128 | EWEADPTNPALRE | HHHHSTT-HHHHH | aaaabaapaaaaa |
1d8d_A_148 | 1d8d | A | 158 | 170 | IIEEQPKNYQVWH | HHHH-TT-HHHHH | aaaabaabaaaaa |
1dow_A_106 | 1dow | A | 110 | 122 | EFADDPCSSVKRG | HHHHSTT-HHHHH | aaaabaaxaaaaa |
1elr_A_241 | 1elr | A | 251 | 263 | AKELDPTNMTYIT | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1elw_A_20 | 1elw | A | 30 | 42 | AIKLDPHNHVLYS | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1elw_A_54 | 1elw | A | 64 | 76 | TVDLKPDWGKGYS | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1elw_A_88 | 1elw | A | 98 | 110 | GLKHEANNPQLKE | HHTT-TT-HHHHH | aaaabaaxaaaaa |
1fch_A_314 | 1fch | A | 324 | 336 | AVQQDPKHMEAWQ | HHHS-TT-HHHHH | aaaabaaxaaaaa |
1fch_A_348 | 1fch | A | 358 | 370 | CLELKPDNQTALM | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1fch_A_467 | 1fch | A | 477 | 489 | ALSVRPNDYLLWN | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1fch_A_501 | 1fch | A | 511 | 523 | ALELQPGYIRSRY | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1fp6_A_227 | 1fp6 | A | 227 | 239 | VIEYDPKAKQADE | HHHH-TTSHHHHH | aaaabaaxaaaaa |
1h6g_A_454 | 1h6g | A | 470 | 482 | ALAAKPQSKLAQE | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1hh8_A_53 | 1hh8 | A | 63 | 75 | SINRDKHLAVAYF | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1hxi_A_365 | 1hxi | A | 375 | 387 | VCQKEPEREEAWR | HHHHSTT-HHHHH | aaaabaaxaaaaa |
1ihg_A_289 | 1ihg | A | 299 | 311 | ALEIDPSNTKALY | HHTT-TT-HHHHH | aaaabaaxaaaaa |
1ihg_A_323 | 1ihg | A | 333 | 345 | AQEIAPEDKAIQA | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1ld8_A_114 | 1ld8 | A | 123 | 135 | AIELNAANYTVWH | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1ld8_A_185 | 1ld8 | A | 192 | 204 | ILNQDAKNYHAWQ | HHHH-TT-HHHHH | aaaabaapaaaaa |
1ld8_A_219 | 1ld8 | A | 226 | 238 | LLKEDVRNNSVWN | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1ld8_A_253 | 1ld8 | A | 266 | 278 | MIKLVPHNESAWN | HHHHSTT-HHHHH | aaaabaaxaaaaa |
1lki_*_76 | 1lki | - | 101 | 113 | QKVLNPTAVSLQV | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1lrz_A_245 | 1lrz | A | 269 | 281 | DIEKRPENKKAHN | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1mhq_A_125 | 1mhq | A | 138 | 150 | WTVWFPEDIKIRD | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1nzn_A_90 | 1nzn | A | 100 | 112 | LLQTEPQNNQAKE | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1pjr_*_390 | 1pjr | - | 400 | 412 | RVIANPDDDLSLL | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1qh5_A_176 | 1qh5 | A | 183 | 195 | ARHVEPGNAAIRE | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1qsa_A_55 | 1qsa | A | 61 | 73 | FVRANPTLPPART | HHHH-TT-HHHHH | aaaabaaxaaaaa |
1rke_A_68 | 1rke | A | 94 | 106 | MLQSDPYSVPARD | HHTT-TT-HHHHH | aaaabaapaaaaa |
1ujk_A_109 | 1ujk | A | 122 | 134 | WTVGLPEEVKIAE | HHHH-TT-HHHHH | aaaabaaxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.3.24 |
CLUSTER: HH.5.7 |
CLUSTER: HH.6.214 |