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Information on SUBCLASS 4.3.1
Subclass Accession number: 4780
Subclass: 4.3.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 28

Average sequence ID (%) : 23.6 +/- 25.6
Average RMSD (Å) : 0.871 +/- 0.342

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: XpcXhpXX
(φψ)-conformation: aalbbbaa
Pattern: [afilmpy][aegkqrs][adnsv][afikltv]x[dehknqsty][GKNQRS]x[afimpvy][cgnstv]x[adeknqrs][cgnsv][dehqrt]
Conservation:-0.3340.9940.5090.120-0.831-0.6322.366-1.403-0.4920.971-0.287-0.784-0.8290.631
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1byg_A_3551byg   A355368PEALREKKFSTKSDHHHHHH----HHHHaaaaaavbbbaaaa
1fgk_A_6691fgk   A669682PEALFDRIYTHQSDHHHHHH----HHHHaaaaaalbbbaaaa
1fmk_*_4311fmk   -431444PEAALYGRFTIKSDHHHHHH----HHHHaaaaaavxxbaaaa
1gjo_A_6721gjo   A672685PEALFDRVYTHQSDHHHHHSS---HHHHaaaaaalbbbaaaa
1gzk_A_3191gzk   A319332PEVLEDNDYGRAVDHHHHHH----THHHaaaaaalbxxaaaa
1j02_A_321j02   A3447MRNFQKGQVSREGFHHHHHHT---HHHHaaaaaavxbbaaaa
1jpa_A_8031jpa   A803816PEAIQYRKFTSASDHHHHHS----HHHHaaaaaalxxbaaaa
1jpu_A_1991jpu   A220233YESVKAKVVTPALEHHHHHTT---HHHHaaaaaalbxbaaaa
1k2p_A_5661k2p   A566579PEVLMYSKFSSKSDHHHHHH----HHHHaaaaaalxxbaaaa
1ks9_A_2611ks9   A266279RRARAHGIAVPENTHHHHHHT---HHHHaaaaaavbxbaaaa
1luf_A_7701luf   A770783PESIFYNRYTTESDHHHHHH----HHHHaaaaaalbbbaaaa
1m66_A_3001m66   A310323RLAKQLKVKMPLCHHHHHHHT---HHHHaaaaaalbxbaaaa
1mp8_A_5911mp8   A591604PESINFRRFTSASDHHHHHH---SHHHHaaaaaalxbbaaaa
1mqb_A_7861mqb   A786799PEAISYRKFTSASDHHHHHS----HHHHaaaaaalxxbaaaa
1n4k_A_4371n4k   A457470AGKLEKGTITQNERHHHHHTS---HHHHaaaaaaIbbxaaaa
1np7_A_3381np7   A345358RELNLTGFMSNRGRHHHHHHS---HHHHaaaaaavbbxaaaa
1opj_A_4271opj   A427440PESLAYNKFSIKSDHHHHHH---SHHHHaaaaaalxbbaaaa
1ouo_A_2041ouo   A212225RIAKIQGNHNPFVQHHHHHHS---HHHHaaaaaavbxxaaaa
1owl_A_3321owl   A339352RQLTETGWMHNRCRHHHHHHS---HHHHaaaaaavbbxaaaa
1owl_A_4341owl   A434447PKDLISGEITPIERHHHHHHT---HHHHaaaaaavbbxaaaa
1oyz_A_1731oyz   A181194FAININKYDNSDIRHHHHHHT---HHHHaaaaaalxbbaaaa
1p4o_A_11511p4o   A11511164PESLKDGVFTTYSDHHHHHH----HHHHaaaaaavxbbaaaa
1qcf_A_4311qcf   A431444PEAINFGSFTIKSDHHHHHH----HHHHaaaaaavxxbaaaa
1qpc_A_4091qpc   A409422PEAINYGTFTIKSDHHHHHH----HHHHaaaaaavxbbaaaa
1r0p_A_12521r0p   A12521265LESLQTQKFTTKSDHHHHHH----HHHHaaaaaalxbbaaaa
1rjb_A_8571rjb   A857870PESLFEGIYTIKSDHHHHHH----HHHHaaaaaavxbbaaaa
1uu3_A_2511uu3   A251264PELLTEKSACKSSDHHHHHT----HHHHaaaaaalbbbaaaa
2pgd_*_2622pgd   -268281ISALEYGVPVTLIGHHHHHHT---HHHHaaaaaavbxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j02_A_321j02   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 34
1j02_A_321j02   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 38
1m66_A_3001m66   A     PLMPALMITIC ACID P - 320
1m66_A_3001m66   A     PLMPALMITIC ACID L - 321
1m66_A_3001m66   A     PLMPALMITIC ACID Q - 324
1m66_A_3001m66   A     PLMPALMITIC ACID I - 325
1m66_A_3001m66   A     PLMPALMITIC ACID I - 328
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 352
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 353
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 354
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 355
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 356
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 358
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 359
1np7_A_3381np7   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 362
1opj_A_4271opj   A     MYRMYRISTIC ACID L - 448
1opj_A_4271opj   A     MYRMYRISTIC ACID I - 451
1opj_A_4271opj   A     MYRMYRISTIC ACID A - 452
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE W - 346
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 347
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE H - 348
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE N - 349
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 350
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE R - 352
1owl_A_3321owl   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 356
1oyz_A_1731oyz   A     MSESELENOMETHIONINE R - 176
1oyz_A_1731oyz   A     MSESELENOMETHIONINE N - 177
1oyz_A_1731oyz   A     MSESELENOMETHIONINE A - 180
1oyz_A_1731oyz   A     MSESELENOMETHIONINE D - 195
1oyz_A_1731oyz   A     MSESELENOMETHIONINE C - 196
1oyz_A_1731oyz   A     MSESELENOMETHIONINE F - 197
1oyz_A_1731oyz   A     MSESELENOMETHIONINE V - 198
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE G - 415
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE T - 416
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE F - 417
1qpc_A_4091qpc   A     PTRO-PHOSPHOTYROSINE T - 418
1uu3_A_2511uu3   A     SEPPHOSPHOSERINE K - 257

Clusters included in this Subclass
CLUSTER: HH.4.14
CLUSTER: HH.5.9