Information on SUBCLASS 4.7.1 |
Subclass Accession number: 4793
Subclass: 4.7.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 10 Average sequence ID (%) : 8.4 +/- 11.6 Average RMSD (Å) : 0.870 +/- 0.211 Consensus geometry
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Consensus Sequence: | XXXXhpph |
(φψ)-conformation: | aappppaa |
Pattern: | x | x | x | x | x | x | [ACLPV] | [dnst] | [DEPQRS] | [acglpwy] | x | x | x |
Conservation: | -0.476 | -0.070 | 0.025 | -0.575 | -0.596 | -0.794 | 0.932 | 1.609 | 2.003 | -1.435 | 0.436 | -0.822 | -0.237 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a6i_*_96 | 1a6i | - | 99 | 111 | VHLGTRPDEKQYD | HHHHS---HHHHH | aaaabxxbaaaaa |
1cv8_*_57 | 1cv8 | - | 59 | 71 | QFQFTGLTPREMI | HHHH----HHHHH | aaaaxxbxaaaaa |
1hbn_C_65 | 1hbn | C | 66 | 78 | IREMVEPIDGAKA | HHHHS---HHHHH | aaaabxxxaaaaa |
1ia9_A_1800 | 1ia9 | A | 1804 | 1816 | FRAKHHCNSCCRK | HHHH----HHHHH | aaaapbxbaaaaa |
1iw0_A_96 | 1iw0 | A | 96 | 108 | WRSRITASPAVID | HHHH----HHHHH | aaaaxbxxaaaaa |
1jms_A_296 | 1jms | A | 297 | 309 | EDLVSCVNRPEAE | HHHHS-B-HHHHH | aaaaxpbxaaaaa |
1ouo_A_195 | 1ouo | A | 196 | 208 | WNKSYPVDEWECT | HHHHS---HHHHH | aaaabpxbaaaaa |
1rcw_A_103 | 1rcw | A | 105 | 117 | ELEAHEPSEAAKA | HHHH----HHHHH | aaaapxpxaaaaa |
1rxw_A_116 | 1rxw | A | 120 | 132 | AQAAGRVDEYIVD | HHHH----HHHHH | aaaaxbxxaaaaa |
1vic_A_193 | 1vic | A | 198 | 210 | QYVQWAPTQLENL | HHHHS---HHHHH | aaaaxxxbaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1a6i_*_96 | 1a6i | * | TNEEMPTY TETRACYCLINE BINDING TUNNEL. | H - 100 |
1a6i_*_96 | 1a6i | * | TNEEMPTY TETRACYCLINE BINDING TUNNEL. | T - 103 |
1a6i_*_96 | 1a6i | * | TNEEMPTY TETRACYCLINE BINDING TUNNEL. | Q - 116 |
Clusters included in this Subclass |
CLUSTER: HH.3.102 |
CLUSTER: HH.5.97 |