Information on SUBCLASS 4.10.3 |
Subclass Accession number: 4808
Subclass: 4.10.3 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 7.0 +/- 9.4 Average RMSD (Å) : 0.800 +/- 0.200 Consensus geometry
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Consensus Sequence: | ppXhXphp |
(φψ)-conformation: | aalpabaa |
Pattern: | [AEP] | x | x | [AEG] | [KRT] | [KL] | [CFL] | x | [DET] | [EHR] | [GQ] | [FIL] | [CDK] | [HKT] | [ALP] | [EY] | x | [LV] | x |
Conservation: | -0.361 | -1.030 | -1.197 | -0.528 | 0.475 | 0.589 | 0.141 | -0.863 | 0.643 | 0.977 | 1.419 | 0.977 | -1.030 | -0.361 | -1.197 | 1.112 | -0.528 | 1.961 | -1.197 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bge_A_12 | 1bge | A | 31 | 49 | ALQETLCATHQLCHPEELV | HHHHHHHHHS----HHHHH | aaaaaaaaaalxabaaaaa |
1bpy_A_108 | 1bpy | A | 108 | 126 | PSAARKFVDEGIKTLEDLR | HHHHHHHHHTT--SHHHHH | aaaaaaaaaavxNbaaaaa |
1ci4_A_28 | 1ci4 | A | 28 | 46 | EVLGKKLEERGFDKAYVVL | HHHHHHHHHTT--SHHHHH | aaaaaaaaaavxabaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ci4_A_28 | 1ci4 | A | MSESELENOMETHIONINE | A - 42 |
1ci4_A_28 | 1ci4 | A | MSESELENOMETHIONINE | Y - 43 |
1ci4_A_28 | 1ci4 | A | MSESELENOMETHIONINE | V - 44 |
1ci4_A_28 | 1ci4 | A | MSESELENOMETHIONINE | L - 46 |
Clusters included in this Subclass |
CLUSTER: HH.4.306 |