Information on SUBCLASS 4.20.1 |
Subclass Accession number: 4829
Subclass: 4.20.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 28.0 +/- 27.5 Average RMSD (Å) : 0.750 +/- 0.396 Consensus geometry
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Consensus Sequence: | hphpLpXp |
(φψ)-conformation: | aabbppaa |
Pattern: | [ekpr] | [adeq] | [qr] | [il] | x | [DEQT] | [KN] | [FIKLV] | [DEKQ] | [CSTV] | [AFGL] | [DEH] | [efl] | [DEQRT] | [l] | [RST] | [adepqs] | [DENQT] | [deq] | [FILM] | [akns] | [adet] | [ILY] | x |
Conservation: | -1.027 | -0.459 | -0.070 | -0.089 | -1.616 | 0.599 | 2.786 | -0.500 | 0.789 | -0.381 | -0.793 | 1.507 | -0.587 | 0.102 | 0.824 | 0.506 | -1.071 | 0.354 | 0.338 | 0.754 | -0.858 | -1.182 | 0.955 | -0.884 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ah4_*_266 | 1ah4 | - | 266 | 289 | PERIAENFQVFDFELSPEDMNTLL | HHHHHHTTTTTT----HHHHHHHH | aaaaaaaaaaaabbxxaaaaaaaa |
1c9w_A_266 | 1c9w | A | 266 | 289 | PARIHENFQVFDFQLSDQEMATIL | HHHHHHHT--SS----HHHHHHHH | aaaaaaaaxaaabbxxaaaaaaaa |
1hul_A_65 | 1hul | A | 77 | 100 | KYIDGQKKKCGEERRRVNQFLDYL | HHHHHHHHTTSS----HHHHHHHH | aaaaaaaaaaaabxbxaaaaaaaa |
1hw6_A_236 | 1hw6 | A | 236 | 259 | RERLEENLDVFDFDLTDTEIAAID | HHHHHHHH--SS----HHHHHHHH | aaaaaaaaaaaabbxxaaaaaaaa |
1j96_A_274 | 1j96 | A | 274 | 297 | EQRIRQNVQVFEFQLTSEEMKAID | HHHHHHHGGGGG----HHHHHHHH | aaaaaaaaaaaabbxxaaaaaaaa |
1lqa_A_312 | 1lqa | A | 312 | 335 | MDQLKTNIESLHLELSEDVLAEIE | HHHHHHHHGGGG----HHHHHHHH | aaaaaaaaaaaaxbxxaaaaaaaa |
1pyf_A_283 | 1pyf | A | 283 | 306 | ADQLIDNIKTADVTLSQEDISFID | HHHHHHHHGGGG----HHHHHHHH | aaaaaaaaaaaaxbxxaaaaaaaa |
1s1p_A_274 | 1s1p | A | 274 | 297 | EQRIRQNVQVFEFQLTAEDMKAID | HHHHHHHGGGGG----HHHHHHHH | aaaaaaaaaaaabbbxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.10.38 |
CLUSTER: HH.7.91 |
CLUSTER: HH.9.21 |