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Information on SUBCLASS 4.20.1
Subclass Accession number: 4829
Subclass: 4.20.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 28.0 +/- 27.5
Average RMSD (Å) : 0.750 +/- 0.396

Consensus geometry
d (Å): 21 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: hphpLpXp
(φψ)-conformation: aabbppaa
Pattern: [ekpr][adeq][qr][il]x[DEQT][KN][FIKLV][DEKQ][CSTV][AFGL][DEH][efl][DEQRT][l][RST][adepqs][DENQT][deq][FILM][akns][adet][ILY]x
Conservation:-1.027-0.459-0.070-0.089-1.6160.5992.786-0.5000.789-0.381-0.7931.507-0.5870.1020.8240.506-1.0710.3540.3380.754-0.858-1.1820.955-0.884
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ah4_*_2661ah4   -266289PERIAENFQVFDFELSPEDMNTLLHHHHHHTTTTTT----HHHHHHHHaaaaaaaaaaaabbxxaaaaaaaa
1c9w_A_2661c9w   A266289PARIHENFQVFDFQLSDQEMATILHHHHHHHT--SS----HHHHHHHHaaaaaaaaxaaabbxxaaaaaaaa
1hul_A_651hul   A77100KYIDGQKKKCGEERRRVNQFLDYLHHHHHHHHTTSS----HHHHHHHHaaaaaaaaaaaabxbxaaaaaaaa
1hw6_A_2361hw6   A236259RERLEENLDVFDFDLTDTEIAAIDHHHHHHHH--SS----HHHHHHHHaaaaaaaaaaaabbxxaaaaaaaa
1j96_A_2741j96   A274297EQRIRQNVQVFEFQLTSEEMKAIDHHHHHHHGGGGG----HHHHHHHHaaaaaaaaaaaabbxxaaaaaaaa
1lqa_A_3121lqa   A312335MDQLKTNIESLHLELSEDVLAEIEHHHHHHHHGGGG----HHHHHHHHaaaaaaaaaaaaxbxxaaaaaaaa
1pyf_A_2831pyf   A283306ADQLIDNIKTADVTLSQEDISFIDHHHHHHHHGGGG----HHHHHHHHaaaaaaaaaaaaxbxxaaaaaaaa
1s1p_A_2741s1p   A274297EQRIRQNVQVFEFQLTAEDMKAIDHHHHHHHGGGGG----HHHHHHHHaaaaaaaaaaaabbbxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ah4_*_2661ah4   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 267
1ah4_*_2661ah4   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 268
1ah4_*_2661ah4   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 269
1ah4_*_2661ah4   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE E - 271
1ah4_*_2661ah4   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 272
1ah4_*_2661ah4   *     AYAN-ACETYLALANINE F - 276
1hw6_A_2361hw6   A     MGMAGNESIUM ION D - 252
1j96_A_2741j96   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 276
1j96_A_2741j96   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 277
1j96_A_2741j96   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 279
1j96_A_2741j96   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 280
1lqa_A_3121lqa   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 313
1lqa_A_3121lqa   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 314
1lqa_A_3121lqa   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 315
1lqa_A_3121lqa   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 317
1lqa_A_3121lqa   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 318
1pyf_A_2831pyf   A     EGLETHYLENE GLYCOL E - 300
1pyf_A_2831pyf   A     EGLETHYLENE GLYCOL S - 303
1pyf_A_2831pyf   A     EGLETHYLENE GLYCOL F - 304
1pyf_A_2831pyf   A     EGLETHYLENE GLYCOL I - 305
1pyf_A_2831pyf   A     EGLETHYLENE GLYCOL K - 307

Clusters included in this Subclass
CLUSTER: HH.10.38
CLUSTER: HH.7.91
CLUSTER: HH.9.21