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Information on SUBCLASS 2.2.13
Subclass Accession number: 483
Subclass: 2.2.13 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 12.5 +/- 15.4
Average RMSD (Å) : 0.362 +/- 0.185

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XpppXX
(φψ)-conformation: bbaabb
Pattern: [aekl][ILV]x[est][degr][DEGKNS][aegknr]xx[cdrty]
Conservation:-0.3132.313-0.5220.969-0.1720.493-0.782-0.472-0.546-0.967
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ee8_A_821ee8   A8594ALVLEGRTLYEEEESS-EEEbxxxaabbbb
1htp_*_551htp   -5867AVESVKATSDEEEESS-EEEbbbbaabbbx
1nhp_*_2251nhp   -225234KVVTDKNAYDEEEESS-EEEbbbbaabbbx
1njh_A_651njh   A6877GLKTEEGWIYEEEESSSEEEbbxxaabbbb
1nrw_A_1001nrw   A102111EVFTGSAIYTEEEESS-EEEbbxbaabbxb
1qmh_A_2341qmh   A240249EVESENITEREEEESS-EEExbxbaabbbb
1qqg_A_831qqg   A8594ALYTRDEHFAEEEESS-EEEbbbbaabbbb
1s68_A_391s68   A4352LIIERDKVTCEEEESS-EEEbxxbaabbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID V - 59
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID S - 61
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID K - 63
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID A - 64
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID T - 65
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID S - 66
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID D - 67
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID V - 68
1htp_*_551htp   *     OSS6-(HYDROXYETHYLDITHIO)-8-(AMINOMETHYLTHIO)OCTANOIC ACID N - 69
1njh_A_651njh   A     IOH2-PROPANOL, ISOPROPANOL R - 66
1njh_A_651njh   A     GOLGLYCEROL R - 66
1njh_A_651njh   A     MSESELENOMETHIONINE V - 67
1njh_A_651njh   A     MSESELENOMETHIONINE L - 81
1s68_A_391s68   A     AMPADENOSINE MONOPHOSPHATE T - 39
1s68_A_391s68   A     AMPADENOSINE MONOPHOSPHATE N - 40
1s68_A_391s68   A     AMPADENOSINE MONOPHOSPHATE F - 41

Clusters included in this Subclass
CLUSTER: HA.3.136
CLUSTER: HA.3.188
CLUSTER: HA.4.39