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Information on SUBCLASS 4.21.1
Subclass Accession number: 4830
Subclass: 4.21.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 22.0 +/- 21.8
Average RMSD (Å) : 0.725 +/- 0.365

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: pppXpphX
(φψ)-conformation: aabaabaa
Pattern: x[ALMT][nqr][EQRY]x[IKLV][lvy]x[acsv][KL][EFKQR]x[hlmvy][ACLV][KMQR][hkrs][HKNR][HQRWY][PQR][ADEST][DHNQR][GIPTV]x[lmp][fqr][afpt][cekr][ilmv][CLV]
Conservation:-0.1440.4730.3630.850-1.0410.659-0.125-1.535-0.5911.5490.228-1.356-0.6710.2721.114-0.7201.1450.7552.1190.2040.446-0.976-1.915-0.860-0.514-1.159-0.4930.5011.421
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dkf_B_3451dkf   B350378MLQEPLLEALKVYVRKRRPSRPHMFPKMLHHHHHHHHHHHHHHHHHSTT-TTHHHHHHaaaaaaaaaaaaaaaaabaabaaaaaaaa
1fcy_A_3471fcy   A352380KLQEPLLEALRLYARRRRPSQPYMFPRMLHHHHHHHHHHHHHHHHH-TT-TTHHHHHHaaaaaaaaaaaaaaaaabaabaaaaaaaa
1i7g_A_3941i7g   A399427KMQEGIVHVLRLHLQSNHPDDIFLFPKLLHHHHHHHHHHHHHHHHH-TT-TTHHHHHHaaaaaaaaaaaaaaaaabaabaaaaaaaa
1mvc_A_3861mvc   A391419ALREKVYASLEAYCKHKYPEQPGRFAKLLHHHHHHHHHHHHHHHHH-TT-TTHHHHHHaaaaaaaaaaaaaaaaabaabaaaaaaaa
1n83_A_4391n83   A444472KLQQKIQLALQHVLQKNHREDGILTKLICHHHHHHHHHHHHHHHHH-TTS-HHHHHHHaaaaaaaaaaaaaaaaabaabaaaaaaaa
1osh_A_4051osh   A410438KLQEPLLDVLQKLCKIHQPENPQHFACLLHHHHHHHHHHHHHHHHH-TT-TTHHHHHHaaaaaaaaaaaaaaaaabaabaaaaaaaa
1qwz_A_301qwz   A3664RANYEKLQQKFQMLMSKHQAHVRPQFESLHHHHHHHHHHHHHHHHH-TT-SHHHHHHHaaaaaaaaaaaaaaaaaxaabNaaaaaaa
1wer_*_8681wer   -868896PTLRYIYGCLQKSVQHKWPTNTTMRTRVVHHHHHHHHHHHHHHHHHSTT-SSHHHHHHaaaaaaaaaaaaaaaaabaaxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fcy_A_3471fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID K - 392
1fcy_A_3471fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID G - 393
1fcy_A_3471fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID A - 394
1fcy_A_3471fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID R - 396
1fcy_A_3471fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID A - 397
1fcy_A_3471fcy   A     5646-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTALENE-2-CARBONYL)-NAPHTALENE-2-CARBOXYLIC ACID L - 400
1i7g_A_3941i7g   A     CPQN,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE V - 407
1i7g_A_3941i7g   A     CPQN,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE L - 410
1i7g_A_3941i7g   A     CPQN,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE H - 411
1i7g_A_3941i7g   A     CPQN,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE S - 414
1i7g_A_3941i7g   A     CPQN,N-BIS(3-D-GLUCONAMIDOPROPYL)DEOXYCHOLAMIDE N - 415
1i7g_A_3941i7g   A     AZ2(2S)-2-ETHOXY-3-[4-(2-{4-[(METHYLSULFONYL)OXY]PHENYL} ETHOXY)PHENYL]PROPANOIC ACID H - 440
1i7g_A_3941i7g   A     AZ2(2S)-2-ETHOXY-3-[4-(2-{4-[(METHYLSULFONYL)OXY]PHENYL} ETHOXY)PHENYL]PROPANOIC ACID V - 444
1i7g_A_3941i7g   A     AZ2(2S)-2-ETHOXY-3-[4-(2-{4-[(METHYLSULFONYL)OXY]PHENYL} ETHOXY)PHENYL]PROPANOIC ACID I - 447
1n83_A_4391n83   A     CLRCHOLESTEROL H - 484
1n83_A_4391n83   A     CLRCHOLESTEROL K - 487
1qwz_A_301qwz   A     NINICKEL (II) ION K - 33
1qwz_A_301qwz   A     NINICKEL (II) ION R - 36

Clusters included in this Subclass
CLUSTER: HH.5.87
CLUSTER: HH.6.51