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Information on SUBCLASS 4.36.1
Subclass Accession number: 4847
Subclass: 4.36.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 18.8 +/- 17.3
Average RMSD (Å) : 0.675 +/- 0.350

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhhhGDhc
(φψ)-conformation: aabplpaa
Pattern: x[ALV][ADE][AKMT][ALTV][AFLW][AP][G][DQ]x[DEGK]xx[AKR]x[LM]
Conservation:-0.423-0.0780.041-0.693-0.462-0.6161.1002.6661.152-0.809-0.423-1.080-1.041-0.195-0.1190.980
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8i_*_3971a8i   -413428RVAAAFPGDVDRLRRMHHHHHSTT-HHHHHHHaaaaabxvxaaaaaaa
1l5w_A_3651l5w   A381396LVEKTWPGDEKVWAKLHHHHHSTT-HHHHHHHaaaaabpvxaaaaaaa
2hgs_A_3162hgs   A316331MLEMLLPGQPEAVARLHHHHHSTT-HHHHHHHaaaaabxvbaaaaaaa
2lhb_*_1162lhb   -123138IADTVAAGDAGFEKLMHHHHHHTT-HHHHHHHaaaaabpvxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 116
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE K - 117
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 118
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 119
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE A - 120
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 123
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 138
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE I - 141
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE C - 142
2lhb_*_1162lhb   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 145

Clusters included in this Subclass
CLUSTER: HH.3.176