Information on SUBCLASS 5.1.2 |
Subclass Accession number: 4870
Subclass: 5.1.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 20 Average sequence ID (%) : 13.2 +/- 18.4 Average RMSD (Å) : 1.010 +/- 0.313 Consensus geometry
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Consensus Sequence: | XXcXXhXXX |
(φψ)-conformation: | aalbpppaa |
Pattern: | x | x | [ailptv] | x | x | x | x | [adeknqr] | x | x | [DGNRS] | x | x | [ILPV] | [ADENPST] | x | [adegnqst] | x | [afiklmtv] |
Conservation: | -0.599 | -0.995 | 0.586 | -0.441 | -0.443 | -0.541 | -0.869 | -0.035 | -0.074 | -0.838 | 2.765 | -0.173 | -0.377 | 2.015 | 1.290 | -0.564 | -0.471 | 0.044 | -0.279 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5t_A_217 | 1b5t | A | 218 | 236 | KQAKKFADMTNVRIPAWMA | HHHHHHHHTTT----HHHH | aaaaaaaaaavxxxwaaaa |
1cc1_L_74 | 1cc1 | L | 80 | 98 | ASVMAQDDAFGVKVTTNGR | HHHHHHHHHHT----HHHH | aaaaaaaaaavxbxxaaaa |
1d7y_A_371 | 1d7y | A | 374 | 392 | FAPLRRLLAVGAKPDRAAL | HHHHHHHHHTT----HHHH | aaaaaaaaaavpbxxaaaa |
1e3d_B_77 | 1e3d | B | 81 | 99 | ASTRCLEDAINKPIPANAT | HHHHHHHHHH-----HHHH | aaaaaaaaaalbwbpaaaa |
1ehk_A_79 | 1ehk | A | 88 | 106 | IMVYLPARELNMRPNMGLM | HHHHHHHHHHT----HHHH | aaaaaaaaaalbxxxaaaa |
1f99_B_4 | 1f99 | B | 6 | 24 | AKVVAQADARGEFLSNTQI | HHHHHHHHHTT----HHHH | aaaaaaaaaalbxxxaaaa |
1fyh_A_103 | 1fyh | A | 111 | 129 | DELIQVMAELGANVSGEFV | HHHHHHHHHTT----HHHH | aaaaaaaaaavxbxxaaaa |
1gh0_B_4 | 1gh0 | B | 6 | 24 | TKVVSQADTRGEMLSTAQI | HHHHHHHHHHT----HHHH | aaaaaaaaaavbxxxaaaa |
1h16_A_116 | 1h16 | A | 116 | 134 | KMIEGSCKAYNRELDPMIK | HHHHHHHHHTT----HHHH | aaaaaaaaaalbbxxaaaa |
1i74_A_119 | 1i74 | A | 121 | 139 | SIVYRLYKENGVAIPKEIA | HHHHHHHHHHT----HHHH | aaaaaaaaaavxxxxaaaa |
1jbo_B_4 | 1jbo | B | 6 | 24 | AKVVAQADARGEFLTNAQF | HHHHHHHHHHT----HHHH | aaaaaaaaaavbxxxaaaa |
1k20_A_121 | 1k20 | A | 123 | 141 | SIVYRMFKEHSVAVSKEIA | HHHHHHHHHTT----HHHH | aaaaaaaaaalbxbxaaaa |
1ld8_B_600 | 1ld8 | B | 605 | 623 | YWILHSLELLDEPIPQIVA | HHHHHHHHHTT----HHHH | aaaaaaaaaalbxbwaaaa |
1m1n_B_321 | 1m1n | B | 327 | 345 | EFLMKVSEISGQPIPASLT | HHHHHHHHHH-----HHHH | aaaaaaaaaavxxxxaaaa |
1m2r_A_251 | 1m2r | A | 252 | 270 | DGLNVYLNKYRIELDPQLE | HHHHHHHHHTT----HHHH | aaaaaaaaaalbbxxaaaa |
1n1b_A_412 | 1n1b | A | 426 | 444 | YFHEAKWYHSGYTPSLDEY | HHHHHHHHHHT----HHHH | aaaaaaaaaavxbxxaaaa |
1phn_B_4 | 1phn | B | 6 | 24 | AKVVAQADARGEFLSNTQL | HHHHHHHHHHT----HHHH | aaaaaaaaaavbxxxaaaa |
1q1r_A_380 | 1q1r | A | 383 | 401 | FNQSKQIITDRLPVEPNLL | HHHHHHHHHTT----HHHH | aaaaaaaaaalxwxxaaaa |
1qgu_B_318 | 1qgu | B | 323 | 341 | ELLMTVSQLSGKPIADALT | HHHHHHHHHH-----HHHH | aaaaaaaaaavxxxxaaaa |
1ubl_L_87 | 1ubl | L | 91 | 109 | ASTRCVDNAVGVHIPKNAT | HHHHHHHHHHT----HHHH | aaaaaaaaaavxbxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h16_A_116 | 1h16 | A | COACOA BINDING SITE FOR CHAIN A | K - 116 |
1h16_A_116 | 1h16 | A | COACOA BINDING SITE FOR CHAIN A | M - 117 |
1h16_A_116 | 1h16 | A | DT1DTL BINDING SITE FOR CHAIN A | T - 138 |
1h16_A_116 | 1h16 | A | DT1DTL BINDING SITE FOR CHAIN A | E - 139 |
Clusters included in this Subclass |
CLUSTER: HH.4.62 |
CLUSTER: HH.6.13 |
CLUSTER: HH.7.25 |