Information on SUBCLASS 5.1.7 |
Subclass Accession number: 4875
Subclass: 5.1.7 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation SCOP : 46457 (>75 %) 46458 (>75 %) 46532 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 37.0 +/- 0.0 Average RMSD (Å) : 0.500 +/- 0.000 Consensus geometry
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Consensus Sequence: | AphXYhXGS |
(φψ)-conformation: | aalbpppaa |
Pattern: | [AS] | [KR] | [V] | [IV] | [S] | [NQ] | [A] | [D] | [A] | [KR] | [AG] | [AE] | [Y] | [LV] | [GS] | [G] | [S] | [DQ] | [IL] | [DQ] | [A] | [L] | [RS] | [AT] | [FL] | [IV] | [AS] |
Conservation: | -0.743 | 0.044 | 0.437 | 0.044 | 0.437 | -0.546 | 0.437 | 2.010 | 0.437 | 0.044 | -0.743 | -1.333 | 2.796 | -0.743 | -0.743 | 2.010 | 0.437 | -0.546 | -0.350 | -0.546 | 0.437 | 0.437 | -1.333 | -0.939 | -0.743 | 0.044 | -0.743 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cpc_B_4 | 1cpc | B | 6 | 32 | AKVVSQADARGEYLSGSQIDALSALVA | HHHHHHHHTTT----HHHHHHHHHHHH | aaaaaaaaaavbxxxaaaaaaaaaaaa |
1eyx_B_6 | 1eyx | B | 6 | 32 | SRVISNADAKAAYVGGSDLQALRTFIS | HHHHHHHHTTT----HHHHHHHHHHHH | aaaaaaaaaalbpxbaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cpc_B_4 | 1cpc | B | CYCPHYCOCYANOBILIN | D - 13 |
1cpc_B_4 | 1cpc | B | CYCPHYCOCYANOBILIN | A - 32 |
1eyx_B_6 | 1eyx | B | CYCPHYCOCYANOBILIN | S - 32 |
Clusters included in this Subclass |
CLUSTER: HH.7.162 |