Information on SUBCLASS 5.3.1 |
Subclass Accession number: 4878
Subclass: 5.3.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 19 Average sequence ID (%) : 12.3 +/- 16.0 Average RMSD (Å) : 0.811 +/- 0.370 Consensus geometry
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Consensus Sequence: | hXpXpXXXX |
(φψ)-conformation: | aapaappaa |
Pattern: | [adeknqrst] | x | [acfilmtv] | x | [adeknrst] | x | [adeknqs] | x | [agnpst] | x | x | x | x |
Conservation: | 0.079 | -1.404 | 0.813 | -1.191 | 1.549 | -0.252 | 1.056 | 0.321 | 1.490 | -0.760 | -0.109 | -0.488 | -1.103 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ak0_*_86 | 1ak0 | - | 95 | 107 | QRVSDSSLSSENH | HHHT-TTS-HHHH | aaaaxaaxxaaaa |
1brm_A_187 | 1brm | A | 188 | 200 | DELATPSSAILDI | HHHH-TT--HHHH | aaaaxaabxaaaa |
1ee4_A_132 | 1ee4 | A | 136 | 148 | VEFMRENQPEMLQ | HHTTSTTS-HHHH | aaaapaaxwaaaa |
1eex_A_84 | 1eex | A | 89 | 101 | NMLCDPNVKRSEI | HHHH-TTS-HHHH | aaaaxaaxxaaaa |
1f2e_A_105 | 1f2e | A | 110 | 122 | VPLFAPATSDEAK | HHHH-SS--HHHH | aaaaxaapxaaaa |
1gnl_A_168 | 1gnl | A | 179 | 191 | AKTLDDSLSVADL | HHTT-TT--HHHH | aaaaxaaxxaaaa |
1gwi_A_167 | 1gwi | A | 175 | 187 | EKFFSTQTPPEEV | HHHH-TTS-HHHH | aaaaxaaxpaaaa |
1hu3_A_958 | 1hu3 | A | 958 | 970 | KIVKERKTSSRIR | HHHHS-SS-HHHH | aaaaxaabpaaaa |
1ibr_B_129 | 1ibr | B | 135 | 147 | ANVTNPNSTEHMK | HHHH-TT--HHHH | aaaapaaxxaaaa |
1iwp_A_85 | 1iwp | A | 90 | 102 | RMLVDIHVSREEI | HHHH-TTS-HHHH | aaaaxaabxaaaa |
1jlr_A_43 | 1jlr | A | 50 | 62 | TIIRDKETPKEEF | HHHH-TT--HHHH | aaaaxaaxxaaaa |
1kxp_D_435 | 1kxp | D | 450 | 462 | SNCCSINSPPLYC | HHHSSTT--HHHH | aaaabaaxxaaaa |
1n1b_A_258 | 1n1b | A | 264 | 276 | AYARRPDMNPLIF | HHHH-TT--HHHH | aaaaxaapxaaaa |
1nm8_A_452 | 1nm8 | A | 459 | 471 | KAMDDSSVTEHQK | HHHT-TTS-HHHH | aaaaxaabxaaaa |
1nwc_A_188 | 1nwc | A | 189 | 201 | SELKDPASSILDI | HHHH-TTS-HHHH | aaaaxaaxxaaaa |
1o5o_A_10 | 1o5o | A | 17 | 29 | TIMRDKNTGPKEF | HHHHSTT--HHHH | aaaapaaxxaaaa |
1orj_A_1076 | 1orj | A | 1091 | 1103 | NTLVKVDKTKEEL | HHHH-TT--HHHH | aaaapaaxbaaaa |
1orj_B_2077 | 1orj | B | 2091 | 2103 | NTLVKVDKTKEEL | HHHH-SS--HHHH | aaaaxaaxbaaaa |
2pgd_*_212 | 2pgd | - | 221 | 233 | EWNKTELDSFLIE | HHTTTTT-BHHHH | aaaabaapbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.4.47 |
CLUSTER: HH.5.33 |
CLUSTER: HH.6.11 |