Information on SUBCLASS 2.2.18 |
Subclass Accession number: 488
Subclass: 2.2.18 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 16.9 +/- 15.4 Average RMSD (Å) : 0.371 +/- 0.138 Consensus geometry
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Consensus Sequence: | hXpXGX |
(φψ)-conformation: | bbaaeb |
Pattern: | [giltv] | [almtv] | [cdgs] | [ADKNS] | x | [G] | [gitv] | x | x |
Conservation: | -0.518 | -0.128 | -0.266 | 0.063 | -0.501 | 2.616 | -0.333 | -0.470 | -0.463 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1axi_B_106 | 1axi | B | 111 | 119 | LTSNGGTVD | EEETTEEEE | xbbaaexab |
1dki_A_184 | 1dki | A | 188 | 196 | GVGKVGGHA | EEETTEEEE | bbbaaexbx |
1fc6_A_335 | 1fc6 | A | 339 | 347 | IADSQGIRD | EEETTEEEE | bbbaaexab |
1k1e_A_25 | 1k1e | A | 25 | 33 | HYDANGEAI | EEETTEEEE | xxbaaexab |
1ktj_A_104 | 1ktj | A | 110 | 118 | VMGDDGVLA | EEETTEEEE | bbbaaexab |
1lxj_A_39 | 1lxj | A | 41 | 49 | TLHSAGTTI | EEETTEEEE | bxbaaebxb |
2hrv_A_109 | 2hrv | A | 110 | 118 | LLCKHGVIG | EEETTEEEE | bbbaaexab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k1e_A_25 | 1k1e | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | H - 25 |
1k1e_A_25 | 1k1e | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | I - 33 |
1lxj_A_39 | 1lxj | A | MSESELENOMETHIONINE | G - 46 |
1lxj_A_39 | 1lxj | A | MSESELENOMETHIONINE | P - 52 |
2hrv_A_109 | 2hrv | A | ZNZINC ION | C - 112 |
2hrv_A_109 | 2hrv | A | ZNZINC ION | K - 113 |
2hrv_A_109 | 2hrv | A | ZNZINC ION | H - 114 |
2hrv_A_109 | 2hrv | A | ZNZINC ION | G - 115 |
2hrv_A_109 | 2hrv | A | ZNZINC ION | I - 117 |
Clusters included in this Subclass |
CLUSTER: HA.1.44 |
CLUSTER: HA.1.90 |
CLUSTER: HA.2.90 |