Information on SUBCLASS 5.7.4 |
Subclass Accession number: 4895
Subclass: 5.7.4 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 6.7 +/- 10.2 Average RMSD (Å) : 0.967 +/- 0.231 Consensus geometry
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Consensus Sequence: | hpXXXXchp |
(φψ)-conformation: | aalbppbaa |
Pattern: | [EKL] | x | [AGW] | [HKT] | x | x | [EKL] | [HP] | [DN] | [FLV] | [DES] | [LPY] | [PTV] | [AIK] | [GK] | x | [ALT] | x | [EN] | [AEL] |
Conservation: | -0.540 | -0.647 | -0.005 | -0.112 | -1.290 | -0.219 | -0.540 | 1.815 | 2.419 | 0.316 | 0.852 | -0.754 | -0.112 | -0.862 | 0.699 | -0.969 | -0.219 | -0.540 | 1.571 | -0.862 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a59_*_297 | 1a59 | - | 310 | 329 | EEAKQIKPNLDYPAGPTYNL | HHHH---B-THHHHHHHHHH | aaaalbxxbaaaaaaaaaaa |
1nyt_A_238 | 1nyt | A | 250 | 269 | LLWHGVLPDVEPVIKQLQEE | HHHHSS---HHHHHHHHHHH | aaaavbxxxaaaaaaaaaaa |
1qo2_A_168 | 1qo2 | A | 168 | 187 | KDGTLQEHDFSLTKKIAIEA | HHHHT----HHHHHHHHHHH | aaaalbxpbaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a59_*_297 | 1a59 | * | COACOENZYME A | M - 309 |
1a59_*_297 | 1a59 | * | COACOENZYME A | K - 313 |
1a59_*_297 | 1a59 | * | COACOENZYME A | I - 315 |
1a59_*_297 | 1a59 | * | CITCITRIC ACID | N - 318 |
1a59_*_297 | 1a59 | * | COACOENZYME A | N - 318 |
1a59_*_297 | 1a59 | * | CITCITRIC ACID | L - 319 |
1a59_*_297 | 1a59 | * | CITCITRIC ACID | D - 320 |
1a59_*_297 | 1a59 | * | COACOENZYME A | D - 320 |
1nyt_A_238 | 1nyt | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | L - 238 |
1nyt_A_238 | 1nyt | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | M - 240 |
1nyt_A_238 | 1nyt | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | M - 240 |
1nyt_A_238 | 1nyt | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | L - 241 |
1nyt_A_238 | 1nyt | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | L - 241 |
1nyt_A_238 | 1nyt | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | V - 242 |
1nyt_A_238 | 1nyt | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Q - 244 |
1nyt_A_238 | 1nyt | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | Q - 244 |
1nyt_A_238 | 1nyt | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | A - 245 |
Clusters included in this Subclass |
CLUSTER: HH.4.336 |
CLUSTER: HH.6.230 |