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Information on SUBCLASS 5.14.1
Subclass Accession number: 4903
Subclass: 5.14.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 31.7 +/- 23.8
Average RMSD (Å) : 0.860 +/- 0.143

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXchXWpXp
(φψ)-conformation: aagpbpbaa
Pattern: [dehkt][AEN]x[GIK][AEKN][aks][AGN][FILV][aikltv][W][DEKT][AEP][ADEN][dnstv][FILM]x[adekqt][Y]
Conservation:-0.598-0.225-0.720-0.750-0.377-0.2970.2380.032-0.6653.259-0.221-0.057-0.045-0.3860.068-0.572-0.5161.832
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c2r_A_551c2r   A5875VALGASGFAWTEEDIATYHHHHHTT-BB-HHHHHHHaaaaaagxbxbaaaaaaa
1ccr_*_581ccr   -5875TADKNMAVIWEENTLYDYHHHHHH--B-SHHHHHHHaaaaaalxxxbaaaaaaa
1cxc_*_591cxc   -6279KEAGAKGLAWDEEHFVQYHHHHHTT-B--HHHHHHHaaaaaagxbxbaaaaaaa
1hro_A_541hro   A5471EANIKSGIVWTPDVLFKYHHHHHH--B--HHHHHHHaaaaaavxbxxaaaaaaa
1i8o_A_461i8o   A4966HNSGEAGLVWTADNIVPYHHHHHTT-B--HHHHHHHaaaaaagxbxxaaaaaaa
1jdl_A_511jdl   A5471HAAGEAGLHWTPENIIAYHHHHHTT-B--HHHHHHHaaaaaagxbxxaaaaaaa
1wej_F_501wej   F5067DANKNKGITWKEETLMEYHHHHH---B-SHHHHHHHaaaaaavbbxbaaaaaaa
1ycc_*_501ycc   -5067DANIKKNVLWDENNMSEYHHHHHH--B--HHHHHHHaaaaaalxxxbaaaaaaa
1ytc_*_501ytc   -5067DAIINKNVKWDEDSMSEYHHHHHH--B--HHHHHHHaaaaaalxxxbaaaaaaa
3c2c_*_503c2c   -5370TEMKAKGLTWTEANLAAYHHHHHTT-B--HHHHHHHaaaaaavxbxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c2r_A_551c2r   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 57
1c2r_A_551c2r   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 67
1c2r_A_551c2r   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 72
1c2r_A_551c2r   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 75
1c2r_A_551c2r   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 76
1ccr_*_581ccr   *     HEMPROTOPORPHYRIN IX CONTAINING FE D - 60
1ccr_*_581ccr   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 72
1ccr_*_581ccr   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 76
1ccr_*_581ccr   *     TMLMETHYL PART OF N-TRIMETHYLLYSINE L - 77
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE E - 59
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE G - 60
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 61
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE W - 71
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE F - 76
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 79
1cxc_*_591cxc   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 80
1hro_A_541hro   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 54
1hro_A_541hro   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 55
1hro_A_541hro   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 56
1hro_A_541hro   A     HEMPROTOPORPHYRIN IX CONTAINING FE W - 63
1hro_A_541hro   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 68
1hro_A_541hro   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 71
1i8o_A_461i8o   A     HECHEME C P - 46
1i8o_A_461i8o   A     HECHEME C L - 47
1i8o_A_461i8o   A     HECHEME C N - 48
1i8o_A_461i8o   A     HECHEME C H - 49
1i8o_A_461i8o   A     HECHEME C W - 58
1i8o_A_461i8o   A     HECHEME C I - 63
1i8o_A_461i8o   A     HECHEME C Y - 66
1i8o_A_461i8o   A     NH3AMMONIA Y - 66
1i8o_A_461i8o   A     HECHEME C L - 67
1i8o_A_461i8o   A     NH3AMMONIA L - 67
1jdl_A_511jdl   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 51
1jdl_A_511jdl   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 52
1jdl_A_511jdl   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 53
1jdl_A_511jdl   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 54
1jdl_A_511jdl   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 68
1wej_F_501wej   F     HEMPROTOPORPHYRIN IX CONTAINING FE N - 52
1wej_F_501wej   F     HEMPROTOPORPHYRIN IX CONTAINING FE K - 53
1wej_F_501wej   F     HEMPROTOPORPHYRIN IX CONTAINING FE W - 59
1wej_F_501wej   F     HEMPROTOPORPHYRIN IX CONTAINING FE L - 64
1wej_F_501wej   F     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 67
1ycc_*_501ycc   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 64
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE S - 51
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 52
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE M - 55
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE W - 62
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE L - 67
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 70
3c2c_*_503c2c   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 71

Clusters included in this Subclass
CLUSTER: HH.5.53
CLUSTER: HH.7.48