Information on SUBCLASS 5.16.1 |
Subclass Accession number: 4905
Subclass: 5.16.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 6.7 +/- 9.7 Average RMSD (Å) : 0.675 +/- 0.126 Consensus geometry
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Consensus Sequence: | XXhXhhpXp |
(φψ)-conformation: | aapppppaa |
Pattern: | x | x | x | [FKLV] | [ADEN] | [AKT] | [AL] | x | x | [AIPY] | x | x | [DEQT] | x | x |
Conservation: | -1.086 | 0.668 | -0.428 | -0.757 | 0.559 | 0.903 | 2.347 | -0.538 | -0.647 | -1.305 | -0.757 | -0.538 | 1.217 | 0.465 | -0.104 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ayf_A_61 | 1ayf | A | 61 | 75 | QHIFEKLEAITDEEN | HHHHTTS----HHHH | aaaaaaxxpxxaaaa |
1e9m_A_54 | 1e9m | A | 54 | 68 | PAWVDKLPKALPTET | HHHHTTS----HHHH | aaaaaabwxxxaaaa |
1lla_*_358 | 1lla | - | 372 | 386 | HEYKNTLKPYDHDVL | HHHHTTS----HHHH | aaaaaaxxpxxaaaa |
1rkp_A_536 | 1rkp | A | 540 | 554 | LQSLAAAVVPSAQTL | HHHHHHS----HHHH | aaaaaaxxxwxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ayf_A_61 | 1ayf | A | FESFE2/S2 (INORGANIC) CLUSTER | M - 77 |
1e9m_A_54 | 1e9m | A | FESFE2/S2 (INORGANIC) CLUSTER | M - 70 |
1lla_*_358 | 1lla | * | CUCOPPER (II) ION | F - 360 |
1lla_*_358 | 1lla | * | CUCOPPER (II) ION | W - 363 |
1lla_*_358 | 1lla | * | CUCOPPER (II) ION | H - 364 |
Clusters included in this Subclass |
CLUSTER: HH.6.272 |
CLUSTER: HH.7.180 |