Information on SUBCLASS 5.18.1 |
Subclass Accession number: 4908
Subclass: 5.18.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 19.4 +/- 15.4 Average RMSD (Å) : 1.033 +/- 0.289 Consensus geometry
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Consensus Sequence: | AXGXXXpXX |
(φψ)-conformation: | aalppbpaa |
Pattern: | [ILV] | x | [AEL] | x | [FGL] | x | x | [IL] | x | [A] | [ANT] | [G] | [EL] | x | [HV] | [KST] | [EG] | x | x | [IL] | [EGK] | [DE] | [KLT] | [ALM] |
Conservation: | 0.695 | -0.991 | -0.915 | -0.685 | -0.991 | -0.685 | -0.915 | 0.985 | 0.030 | 1.615 | -0.301 | 2.995 | -0.304 | -0.608 | -0.242 | -0.071 | 0.386 | -0.304 | -0.915 | 0.985 | -0.378 | 1.445 | -0.685 | -0.148 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bia_*_5 | 1bia | - | 6 | 29 | VPLKLIALLANGEFHSGEQLGETL | HHHHHHHHHTTSS-B-HHHHHHHH | aaaaaaaaaaavxxbxaaaaaaaa |
1hlv_A_75 | 1hlv | A | 81 | 104 | LIAWFQQIRAAGLPVKGIILKEKA | HHHHHHHHGGGT----HHHHHHHH | aaaaaaaaaaavbxbpaaaaaaaa |
1ncx_*_115 | 1ncx | - | 115 | 138 | IEELGEILRATGEHVTEEDIEDLM | HHHHHHHHHTT-S---HHHHHHHH | aaaaaaaaaaavxxxbaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ncx_*_115 | 1ncx | * | CDCADMIUM ION | E - 117 |
1ncx_*_115 | 1ncx | * | CDCADMIUM ION | S - 141 |
Clusters included in this Subclass |
CLUSTER: HH.8.76 |