Information on SUBCLASS 5.18.2 |
Subclass Accession number: 4909
Subclass: 5.18.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 11.6 +/- 12.0 Average RMSD (Å) : 1.033 +/- 0.153 Consensus geometry
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Consensus Sequence: | XpGXXXpXp |
(φψ)-conformation: | aalppbpaa |
Pattern: | x | x | x | [LT] | [AIV] | [AGT] | [LT] | [KLT] | [AT] | [KNS] | [G] | [AE] | x | [FHQ] | [NST] | x | [ETY] | [DNQ] | [ILV] | [FGK] | x | [AMT] | x |
Conservation: | -0.575 | 0.202 | -0.398 | 0.278 | 0.220 | -0.222 | 0.278 | -0.663 | 0.639 | 0.309 | 3.579 | 0.557 | -0.752 | -0.222 | 0.486 | -1.459 | -0.575 | 0.486 | 0.928 | -1.105 | -0.929 | -0.310 | -0.752 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bia_*_5 | 1bia | - | 7 | 29 | PLKLIALLANGEFHSGEQLGETL | HHHHHHHHTTSS-B-HHHHHHHH | aaaaaaaaaavxxbxaaaaaaaa |
1d02_A_12 | 1d02 | A | 12 | 34 | WQALAGLKASGAEQNLYNVFNAV | HHHHHHHHHTT----HHHHHHHH | aaaaaaaaaavpxxbaaaaaaaa |
1uw3_A_173 | 1uw3 | A | 185 | 207 | KQHTVTTTTKGENFTETDIKIME | HHHHHHHHHTT----HHHHHHHH | aaaaaaaaaavbbbxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1uw3_A_173 | 1uw3 | A | PO4PHOSPHATE ION | K - 204 |
1uw3_A_173 | 1uw3 | A | PO4PHOSPHATE ION | R - 208 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uw3_A_173 | 1uw3 | A | AC2PO4 BINDING SITE FOR CHAIN A | K - 204 |
1uw3_A_173 | 1uw3 | A | AC2PO4 BINDING SITE FOR CHAIN A | R - 208 |
Clusters included in this Subclass |
CLUSTER: HH.6.125 |