Information on SUBCLASS 5.25.1 |
Subclass Accession number: 4917
Subclass: 5.25.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 23.4 Average RMSD (Å) : 0.625 +/- 0.150 Consensus geometry
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Consensus Sequence: | XXXXXpXhh |
(φψ)-conformation: | aalaaapaa |
Pattern: | [AL] | [FGY] | [ADQS] | [AFL] | x | [DKNT] | x | [AQT] | x | [LT] | x | [DQ] | x | [LP] | [FMPW] | [HLW] | x | x | [ALM] | x | x |
Conservation: | 0.975 | 0.035 | -0.287 | -0.034 | -0.868 | -0.034 | -0.708 | -0.000 | 0.181 | 1.102 | 0.263 | 2.450 | -0.729 | 1.773 | -0.793 | 0.583 | -0.877 | -1.130 | 0.610 | -0.961 | -1.551 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hz4_A_107 | 1hz4 | A | 117 | 137 | AFQLINEQHLEQLPMHEFLVR | HHHHHHHTT-TTSTHHHHHHH | aaaaaaaalaaaxaaaaaaaa |
1mpx_A_253 | 1mpx | A | 253 | 273 | AGDFAKAAGLEQLPWWHKLTE | HHHHHHHTTGGGSHHHHHHHH | aaaaaaaavaaaxaaaaaaaa |
1nx9_A_284 | 1nx9 | A | 284 | 304 | AGSFATQAGLDQYPFWQRMHA | HHHHHHHHTGGG-HHHHHHHH | aaaaaaaavaaaxaaaaaaaa |
1uou_A_193 | 1uou | A | 198 | 218 | LYAARDVTATVDSLPLITASI | HHHHHHHTT-SS-HHHHHHHH | aaaaaaaalaaabaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1uou_A_193 | 1uou | A | AC1CMU BINDING SITE FOR CHAIN A | R - 202 |
1uou_A_193 | 1uou | A | AC1CMU BINDING SITE FOR CHAIN A | I - 214 |
1uou_A_193 | 1uou | A | AC1CMU BINDING SITE FOR CHAIN A | S - 217 |
Clusters included in this Subclass |
CLUSTER: HH.6.93 |