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Information on SUBCLASS 5.26.1
Subclass Accession number: 4918
Subclass: 5.26.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 8.6 +/- 9.4
Average RMSD (Å) : 1.075 +/- 0.320

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhcXchXXh
(φψ)-conformation: aalpappaa
Pattern: [ALT][AEKL]x[GLV]x[AKTV][AILV]xxx[AFLY][GNQ]x[DNP]x[GPST]xx[ET][ILV]x[DQR][ILMV][AGIL][NQRT][EKQ][FGTV]
Conservation:0.218-0.834-1.049-0.438-1.192-0.4050.597-1.049-0.476-0.787-0.0470.800-0.4101.068-0.402-0.262-0.9060.3001.9731.881-0.8340.7911.527-0.9770.2391.863-1.192
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fi4_A_1201fi4   A126152AALVSAIAKLYQLPQSTSEISRIARKGHHHHHHHHHHTT--S-HHHHHHHHHHHaaaaaaaaaaalxappaaaaaaaaaaa
1mzb_A_351mzb   A3561AEDVYKALMEAGEDVGLATVYRVLTQFHHHHHHHHHHTT----HHHHHHHHHHHaaaaaaaaaaalxabxaaaaaaaaaaa
1n0y_A_291n0y   A2955TKELGTVMRSLGQNPTEAELQDMINEVHHHHHHHHHTTT----HHHHHHHHHHHaaaaaaaaaaavbaxxaaaaaaaaaaa
1pie_A_1381pie   A144170LLVGVVLDDLFNLNVPRLELVQLGQKTHHHHHHHHHHTT----HHHHHHHHHHHaaaaaaaaaaalxaxxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fi4_A_1201fi4   A     MSESELENOMETHIONINE Y - 136
1fi4_A_1201fi4   A     MSESELENOMETHIONINE Q - 137
1fi4_A_1201fi4   A     MSESELENOMETHIONINE L - 138
1fi4_A_1201fi4   A     MSESELENOMETHIONINE P - 139
1fi4_A_1201fi4   A     MSESELENOMETHIONINE Q - 140
1fi4_A_1201fi4   A     MSESELENOMETHIONINE S - 143
1fi4_A_1201fi4   A     MSESELENOMETHIONINE E - 144
1fi4_A_1201fi4   A     MSESELENOMETHIONINE S - 146
1fi4_A_1201fi4   A     MSESELENOMETHIONINE R - 147
1fi4_A_1201fi4   A     MSESELENOMETHIONINE R - 150
1n0y_A_291n0y   A     PBLEAD (II) ION E - 31
1pie_A_1381pie   A     PO4PHOSPHATE ION S - 138
1pie_A_1381pie   A     PO4PHOSPHATE ION S - 139
1pie_A_1381pie   A     GALD-GALACTOSE E - 171

Clusters included in this Subclass
CLUSTER: HH.6.91