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Information on SUBCLASS 5.31.1
Subclass Accession number: 4923
Subclass: 5.31.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.7 +/- 21.9
Average RMSD (Å) : 0.900 +/- 0.346

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: XpGhhXcXX
(φψ)-conformation: aagbppbaa
Pattern: [EGR][DEG][ITV][AIT][EQR][AIY][IL]x[KT][CLV][AGL]xx[ER][G][IVY][AIL][FLT][DN][HP][SV][AY][DET][FG][EK][AST][FMV][QRY][GM][IL][IKV][ADE][KL][AIL]
Conservation:-0.884-0.1680.037-0.7820.446-0.9871.115-0.6950.442-0.168-1.294-1.294-0.8840.7363.8230.037-0.475-0.7821.6570.977-0.6180.450-0.066-0.0761.1690.037-0.168-0.373-0.2071.115-0.782-0.373-0.486-0.475
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f2d_A_2741f2d   A274307EGTIEAIRTCAEQEGVLTDPVYEGKSMQGLIALIHHHHHHHHHHHHHHS----TTTHHHHHHHHHHHHaaaaaaaaaaaaaavxxbbaaaaaaaaaaaaaaa
1j0a_A_2611j0a   A261294GEVAQIIRKVGTREGIILDPVYTGKAFYGLVDLAHHHHHHHHHHHHHHS----TTTHHHHHHHHHHHHaaaaaaaaaaaaaavbxxbaaaaaaaaaaaaaaa
1k8k_B_1861k8k   B187220RDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLHHHHHHHHHHHHHTT----TTTTHHHHHHHHHHHaaaaaaaaaaaaaagbxxxaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f2d_A_2741f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE D - 292
1f2d_A_2741f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 295
1f2d_A_2741f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE E - 296
1j0a_A_2611j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE D - 279
1j0a_A_2611j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE Y - 282
1j0a_A_2611j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 283

Clusters included in this Subclass
CLUSTER: HH.9.34