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Information on SUBCLASS 5.34.1
Subclass Accession number: 4926
Subclass: 5.34.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 38.9 +/- 37.2
Average RMSD (Å) : 1.167 +/- 0.462

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hXpppXhXp
(φψ)-conformation: aapabpbaa
Pattern: xxxxxxxxxxxxxxxxxxxxxxxx
Conservation:-1.6620.000-0.2371.6620.475-0.7120.2370.000-0.9500.4750.712-0.237-0.9500.000-0.7120.237-0.7121.1872.612-0.475-0.475-0.4751.425-1.425
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1k0d_A_2241k0d   A228251GQALHFRYFHSQKIASAVERYTDEHHHHHHHHT-SS--HHHHHHHHHHaaaaaaaaaxabxbaaaaaaaaaa
1k0d_D_2241k0d   D228251GQALHFRYFHSQKIASAVERYTDEHHHHHHHHTSSS--HHHHHHHHHHaaaaaaaaaxabxbaaaaaaaaaa
1oyz_A_2251oyz   A225248LSVLCDELKKNTVYDDIIEAAGELHHHHHHHHTSSS--HHHHHHHHHHaaaaaaaaaxabbxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1oyz_A_2251oyz   A     MSESELENOMETHIONINE L - 232
1oyz_A_2251oyz   A     MSESELENOMETHIONINE K - 233
1oyz_A_2251oyz   A     MSESELENOMETHIONINE V - 237
1oyz_A_2251oyz   A     MSESELENOMETHIONINE I - 242

Clusters included in this Subclass
CLUSTER: HH.7.153