Information on SUBCLASS 5.34.1 |
Subclass Accession number: 4926
Subclass: 5.34.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 38.9 +/- 37.2 Average RMSD (Å) : 1.167 +/- 0.462 Consensus geometry
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Consensus Sequence: | hXpppXhXp |
(φψ)-conformation: | aapabpbaa |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -1.662 | 0.000 | -0.237 | 1.662 | 0.475 | -0.712 | 0.237 | 0.000 | -0.950 | 0.475 | 0.712 | -0.237 | -0.950 | 0.000 | -0.712 | 0.237 | -0.712 | 1.187 | 2.612 | -0.475 | -0.475 | -0.475 | 1.425 | -1.425 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k0d_A_224 | 1k0d | A | 228 | 251 | GQALHFRYFHSQKIASAVERYTDE | HHHHHHHHT-SS--HHHHHHHHHH | aaaaaaaaaxabxbaaaaaaaaaa |
1k0d_D_224 | 1k0d | D | 228 | 251 | GQALHFRYFHSQKIASAVERYTDE | HHHHHHHHTSSS--HHHHHHHHHH | aaaaaaaaaxabxbaaaaaaaaaa |
1oyz_A_225 | 1oyz | A | 225 | 248 | LSVLCDELKKNTVYDDIIEAAGEL | HHHHHHHHTSSS--HHHHHHHHHH | aaaaaaaaaxabbxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oyz_A_225 | 1oyz | A | MSESELENOMETHIONINE | L - 232 |
1oyz_A_225 | 1oyz | A | MSESELENOMETHIONINE | K - 233 |
1oyz_A_225 | 1oyz | A | MSESELENOMETHIONINE | V - 237 |
1oyz_A_225 | 1oyz | A | MSESELENOMETHIONINE | I - 242 |
Clusters included in this Subclass |
CLUSTER: HH.7.153 |