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Information on SUBCLASS 6.9.1
Subclass Accession number: 4949
Subclass: 6.9.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 12.6 +/- 14.5
Average RMSD (Å) : 0.983 +/- 0.172

Consensus geometry
d (Å): 17 delta (°): 135-180 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XXchXhhXXX
(φψ)-conformation: aalpppppaa
Pattern: [aklv][aikl][ehqs][ACGS][EKMQ][aef]x[gkn][lv][epr][mpv][fpv][ADNSV][afkl][ades][ADEQST][fl][GLW][ADEKS]
Conservation:-0.863-0.771-0.1071.2891.861-0.659-1.7080.2810.7260.300-0.020-1.528-0.281-1.177-0.5050.1870.9201.4920.563
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dms_*_5341dms   -546564AKQGKAGGVEMPAFDAFWAHHHHHHTT-----HHHHHHaaaaaaavxxbwxaaaaaa
1dp7_P_191dp7   P2745LLHSQEQKLEPVNAASFGKHHHHHHTT-----HHHHHHaaaaaaalbxxxxaaaaaa
1ekf_A_931ekf   A101119LRSAMRLCLPSFDKLELLEHHHHHHTT-----HHHHHHaaaaaaalxpxbxaaaaaa
1eov_A_2151eov   A215233EAEAEAAGLPVVNLDTRLDHHHHHHTT-----HHHHHHaaaaaaavxxbxxaaaaaa
1eu1_A_5341eu1   A546564VKQAEFKNVAMPSFEDFWSHHHHHHTT-----HHHHHHaaaaaaalbxbwxaaaaaa
1fnn_A_3101fnn   A318336KIVCEEYGERPRVHSQLWSHHHHHHTT-----HHHHHHaaaaaaavbxxxxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dp7_P_191dp7   P     EDO1,2-ETHANEDIOL S - 49
1dp7_P_191dp7   P     EDO1,2-ETHANEDIOL V - 50
1ekf_A_931ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE N - 96
1ekf_A_931ekf   A     PLPPYRIDOXAL-5'-PHOSPHATE R - 99
1eu1_A_5341eu1   A     GLCGLUCOSE E - 565

Clusters included in this Subclass
CLUSTER: HH.8.8