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Information on SUBCLASS 6.17.1
Subclass Accession number: 4959
Subclass: 6.17.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 54.1 +/- 24.6
Average RMSD (Å) : 0.700 +/- 0.453

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXXLCGXTXX
(φψ)-conformation: aalabpabaa
Pattern: [S][n][AS][IM][ALM][R][FY][IL][A][KR][KT][HV][hn][LM][C][G][AE][ST][EP][ekw][E][DKQR][il][QR]x[D][IV][LV][e][DN][HQT][AFILV][m][D]x[R][LM][AKQ][FIL][AI][kmr]
Conservation:0.593-0.741-0.160-0.086-0.7161.1311.1270.0690.5930.377-0.376-0.317-0.4160.1793.2811.669-0.4510.147-0.227-1.5111.131-0.778-1.0860.126-1.1871.6690.334-0.212-0.7020.413-0.809-1.041-0.5531.669-1.4931.1310.184-0.770-0.465-0.554-1.170
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b4p_A_721b4p   A72112SNAIMRYLARKHHLCGETEEERIRVDVLENQAMDTRLQLAMHHHHHHHHHHHTT-S--SHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalabxabaaaaaaaaaaaaaaaaaaaaaaa
1gsu_A_721gsu   A72112SNAILRYIARKHNMCGETEVEKQRVDVLENHLMDLRMAFARHHHHHHHHHHTTT-S--SHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalabxaxaaaaaaaaaaaaaaaaaaaaaaa
1hna_*_721hna   -72112SNAILRYIARKHNLCGESEKEQIREDILENQFMDSRMQLAKHHHHHHHHHHHTT-S--SHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalabxaxaaaaaaaaaaaaaaaaaaaaaaa
1m0u_A_1101m0u   A110150SISMARFLAKTVGLCGATPWEDLQIDIVVDTINDFRLKIAVHHHHHHHHHHHHT-S-SSHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaavabbabaaaaaaaaaaaaaaaaaaaaaaa
2gst_A_722gst   A72112SNAIMRYLARKHHLCGETEEERIRADIVENQVMDNRMQLIMHHHHHHHHHHHTT-S-SSHHHHHHHHHHHHHHHHHHHHHHHaaaaaaaaaaaalaxxabaaaaaaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE S - 72
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE N - 73
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE M - 104
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE R - 107
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE L - 108
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE A - 111
1b4p_A_721b4p   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE Y - 115
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE S - 72
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE N - 73
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE N - 101
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE M - 104
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE D - 105
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE M - 108
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE A - 111
1gsu_A_721gsu   A     GTXS-HEXYLGLUTATHIONE Y - 115
1hna_*_721hna   *     GDNGLUTATHIONE S-(2,4 DINITROBENZENE) S - 72
1hna_*_721hna   *     GDNGLUTATHIONE S-(2,4 DINITROBENZENE) N - 73
1hna_*_721hna   *     GDNGLUTATHIONE S-(2,4 DINITROBENZENE) M - 104
1m0u_A_1101m0u   A     GTTGLUTATHIONE S - 110
1m0u_A_1101m0u   A     GTTGLUTATHIONE I - 111
1m0u_A_1101m0u   A     GTTGLUTATHIONE M - 113
1m0u_A_1101m0u   A     GTTGLUTATHIONE N - 142
1m0u_A_1101m0u   A     GTTGLUTATHIONE R - 145
2gst_A_722gst   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE N - 101
2gst_A_722gst   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE D - 105
2gst_A_722gst   A     GPS(9S,10S)-9-(S-GLUTATHIONYL)-10-HYDROXY-9,10-DIHYDROPHENANTHRENE I - 111

Clusters included in this Subclass
CLUSTER: HH.7.41