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Information on SUBCLASS 6.21.1
Subclass Accession number: 4964
Subclass: 6.21.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 13.1 +/- 17.8
Average RMSD (Å) : 1.260 +/- 0.391

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhcXpphppp
(φψ)-conformation: aalpabbpaa
Pattern: x[APQ][GSTV][ILV]xx[agi][ALTV][IK]x[ACFL][GKNQ][IKTV][DEQR][EHRS][AILVY][DEST][DENPS][DRS][alv][fv]xx[ALVY]x[EKS][afkl][iltv][ACFLT]
Conservation:-0.9460.509-0.5152.871-0.120-0.983-1.6190.236-0.110-0.552-0.0970.769-0.0791.1200.7440.0250.8860.3161.520-0.334-0.396-0.920-0.796-0.264-0.7001.982-1.314-0.499-0.732
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1f1e_A_851f1e   A85113RATVRRILKRAGIERASSDAVDLYNKLICHHHHHHHHHHTT--B--HHHHHHHHHHHHaaaaaaaaaaagxabbxaaaaaaaaaaaa
1gz3_A_4711gz3   A471499FPGVALAVILCNTRHISDSVFLEAAKALTHHHHHHHHHHTT-----HHHHHHHHHHHHaaaaaaaaaaalxabbxaaaaaaaaaaaa
1ng6_A_201ng6   A3058KASLQNEAIKLKKDSLTEDEELTVLSRELHHHHHHHHHHTTSS---HHHHHHHHHHHHaaaaaaaaaaalbabbxaaaaaaaaaaaa
1o0s_A_4831o0s   A483511FPGVALGTILFQIRHVDNDLFLLAAKKVAHHHHHHHHHHHTBS---HHHHHHHHHHHHaaaaaaaaaaalxabbbaaaaaaaaaaaa
1taf_A_201taf   A2250AQVIMSILKELNVQEYEPRVVNQLLEFTFHHHHHHHHHHTT-----THHHHHHHHHHHaaaaaaaaaaavbabbxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f1e_A_851f1e   A     MSESELENOMETHIONINE R - 99
1f1e_A_851f1e   A     MSESELENOMETHIONINE A - 100
1f1e_A_851f1e   A     MSESELENOMETHIONINE S - 101
1f1e_A_851f1e   A     MSESELENOMETHIONINE D - 103
1f1e_A_851f1e   A     MSESELENOMETHIONINE A - 104
1f1e_A_851f1e   A     MSESELENOMETHIONINE Y - 108
1f1e_A_851f1e   A     MSESELENOMETHIONINE L - 111
1f1e_A_851f1e   A     MSESELENOMETHIONINE I - 112
1f1e_A_851f1e   A     MSESELENOMETHIONINE C - 113
1f1e_A_851f1e   A     MSESELENOMETHIONINE A - 115
1f1e_A_851f1e   A     MSESELENOMETHIONINE T - 116
1f1e_A_851f1e   A     MSESELENOMETHIONINE E - 118
1f1e_A_851f1e   A     MSESELENOMETHIONINE L - 119
1taf_A_201taf   A     ZNZINC ION L - 32
1taf_A_201taf   A     ZNZINC ION N - 33
1taf_A_201taf   A     ZNZINC ION E - 38

Clusters included in this Subclass
CLUSTER: HH.6.255
CLUSTER: HH.8.37