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Information on SUBCLASS 6.25.1
Subclass Accession number: 4968
Subclass: 6.25.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 48.6 +/- 22.9
Average RMSD (Å) : 0.300 +/- 0.141

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: hXphXNXGLX
(φψ)-conformation: aapaaapgaa
Pattern: [DKPQ][AKV][E][FL][AKN][DH][GPS][AS][N][AN][G][L][dq]x[AG][FLV][KNR][FL][L][EK][P][IL][HK][ADEK]
Conservation:-0.952-1.0931.247-0.203-1.0200.382-0.807-0.1031.806-0.7461.8060.689-1.201-0.827-0.203-0.685-0.293-0.2030.6890.2342.3640.197-0.091-0.987
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1apx_A_631apx   A6386QAELAHGANNGLDIAVRLLEPIKEHHHHTSGGGTTHHHHHHHHHHHHHaaaaaxaaapvaaaaaaaaaaaaa
1iyn_A_591iyn   A5982DVELKHGANAGLVNALNLLKPIKDHHHHTSGGGTTTHHHHHHHHHHHHaaaaaxaaapvaaaaaaaaaaaaa
1jdr_A_741jdr   A7497KKEFNDPSNAGLQNGFKFLEPIHKHHHHT-GGGTTTHHHHHHHHHHHHaaaaaxaaapgaaaaaaaaaaaaa
1oaf_A_631oaf   A6386PAELAHSANNGLDIAVRLLEPLKAHHHHTSGGGTTHHHHHHHHHHHHHaaaaapaaapgaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1apx_A_631apx   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 72
1iyn_A_591iyn   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 68
1jdr_A_741jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 83
1jdr_A_741jdr   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 84
1oaf_A_631oaf   A     ASCASCORBIC ACID I - 76
1oaf_A_631oaf   A     ASCASCORBIC ACID L - 80

Clusters included in this Subclass
CLUSTER: HH.7.90