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Information on SUBCLASS 6.29.1
Subclass Accession number: 4972
Subclass: 6.29.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : - (>75 %)  1.14 (>75 %)  1.14.13 (>75 %)  1.14.13.39 (>75 %)  
GO : GO:0004497 (>75 %)  GO:0004517 (>75 %)  GO:0005489 (>75 %)  GO:0005509 (>75 %)  GO:0005515 (>75 %)  GO:0005516 (>75 %)  GO:0010181 (>75 %)  GO:0016705 (>75 %)  GO:0016709 (>75 %)  GO:0048037 (>75 %)  GO:0050662 (>75 %)  
SCOP : 56511 (>75 %)  56512 (>75 %)  56513 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 61.1 +/- 15.3
Average RMSD (Å) : 0.250 +/- 0.100

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: hhDXpRYNhL
(φψ)-conformation: aapaaFalaa
Pattern: [R][DN][FL][CI][D][DPT][HQY][R][Y][N][IL][L][E][DEK][V][AG]xx
Conservation:0.766-0.033-0.427-0.1131.298-1.179-0.5770.7661.8311.298-0.2810.2330.766-0.7110.233-0.619-1.966-1.286
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jwk_A_3751jwk   A375392RDFCDTQRYNILEEVGRRHHHH-TTTT--HHHHHHHaaaaxaaFalaaaaaaaa
1m9m_A_3651m9m   A365382RNLCDPHRYNILEDVAVCHHHHSTTTT--HHHHHHHaaaapaaFalaaaaaaaa
1mjt_A_2341mjt   A234251RNFIDDYRYNLLEKVADAHHHH-TTTT--HHHHHHHaaaapaaFalaaaaaaaa
1q2o_A_3671q2o   A367384RDLCDPHRYNILEDVAVCHHHH-TTTT--HHHHHHHaaaapaaFalaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jwk_A_3751jwk   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 375
1jwk_A_3751jwk   A     HBI7,8-DIHYDROBIOPTERIN R - 375
1m9m_A_3651m9m   A     MPD2-METHYL-2,4-PENTANEDIOL R - 365
1mjt_A_2341mjt   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 234
1mjt_A_2341mjt   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE R - 234
1mjt_A_2341mjt   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE Y - 240
1q2o_A_3671q2o   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 367
1q2o_A_3671q2o   A     BH4(6R,1'R,2'S)-5,6,7,8 TETRAHYDROBIOPTERIN R - 367
1q2o_A_3671q2o   A     GOLGLYCEROL R - 367
1q2o_A_3671q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE D - 368
1q2o_A_3671q2o   A     GOLGLYCEROL D - 371
1q2o_A_3671q2o   A     GOLGLYCEROL H - 373
1q2o_A_3671q2o   A     DP1L-N(OMEGA)-NITROARGININE-2,4-L-DIAMINOBUTYRIC AMIDE R - 374
1q2o_A_3671q2o   A     CACCACODYLATE ION V - 383
1q2o_A_3671q2o   A     CACCACODYLATE ION C - 384

Clusters included in this Subclass
CLUSTER: HH.6.111