Information on SUBCLASS 6.35.1 |
Subclass Accession number: 4978
Subclass: 6.35.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016903 (>50 %) GO:0018492 (>50 %) SCOP : 56820 (>50 %) 56821 (>50 %) 82852 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 33.3 +/- 28.4 Average RMSD (Å) : 1.133 +/- 0.493 Consensus geometry
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Consensus Sequence: | XXGXphppXX |
(φψ)-conformation: | aalpbpabaa |
Pattern: | [AP] | x | [IY] | x | [AC] | x | [SW] | [G] | x | [ET] | [FV] | [KR] | [EKT] | [EL] | [EGK] | [DE] | [LMV] | [PV] | [PW] | [AI] | [L] | x | [HR] | [KLM] | [GR] | [AM] |
Conservation: | 0.239 | -1.235 | -0.072 | -0.713 | 0.500 | -0.537 | -0.254 | 3.225 | -1.131 | -0.131 | -0.235 | 1.224 | -0.641 | -1.235 | -0.924 | 1.390 | 0.114 | 0.343 | 0.130 | -0.562 | 1.528 | -0.282 | 0.777 | -0.735 | -0.386 | -0.399 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1esw_A_408 | 1esw | A | 415 | 440 | ARYLADWGITFREEEEVPWALMHLGM | HHHHHHTT---SSGGGHHHHHHHHHH | aaaaaaavbbbaxaaaaaaaaaaaaa |
1oao_C_63 | 1oao | C | 63 | 88 | PVIRCFSGEEVKKLGDLPPILNRKRA | HHHHHHT-----BGGGHHHHHHHHHH | aaaaaaavxxxabaaaaaaaaaaaaa |
1ru3_A_66 | 1ru3 | A | 66 | 91 | PVIRAFSGEEVRTLKDMVPILNRMRA | HHHHHHT-----BGGGHHHHHHHHHH | aaaaaaavpbxabaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oao_C_63 | 1oao | C | GOLGLYCEROL | R - 66 |
1oao_C_63 | 1oao | C | GOLGLYCEROL | E - 72 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | P - 66 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | R - 69 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | E - 75 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | V - 76 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | R - 77 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | T - 78 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | V - 83 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | L - 86 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | N - 87 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | R - 88 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | R - 90 |
1ru3_A_66 | 1ru3 | A | GOLGLYCEROL | A - 91 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oao_C_63 | 1oao | C | FC8GOL BINDING SITE FOR CHAIN C | R - 66 |
1oao_C_63 | 1oao | C | FC7SO4 BINDING SITE FOR CHAIN C | R - 85 |
1oao_C_63 | 1oao | C | FC7SO4 BINDING SITE FOR CHAIN C | K - 86 |
1oao_C_63 | 1oao | C | FC7SO4 BINDING SITE FOR CHAIN C | Q - 89 |
Clusters included in this Subclass |
CLUSTER: HH.9.32 |