ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.1.1

Subclass Accession number: 50
Subclass: 8.1.1
Type: EH beta-alpha
DB: ArchDB-KI

Number of loops: 4

Average sequence ID (%) : 51.7 +/- 0.9
Average RMSD (Å) : 0.31 +/- 0.08

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	WNGPMGVFEhpX
(φψ)-conformation:	bbepabpaabaa

Pattern:	{ST}	[AIV]	[IV]	[W]	[N]	[G]	[P]	[MP]	[G]	[V]	[F]	[E]	[FIM]	{DE}	x	[FY]	{A}	{AEK}	[G]	[T]	[FK]	{A}	[ILV]	[AL]	{EKL}	[AE]	[ILMV]	[AGV]	{AEK}
Conservation:	-0.839	-0.580	0.077	3.054	1.058	1.058	1.457	-0.523	1.058	0.260	1.058	0.659	-0.550	-0.872	-1.137	0.559	-0.290	-0.987	1.058	0.659	-0.757	-0.585	-0.232	-0.657	-1.187	-0.606	-0.413	-0.939	-0.862

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
16pk_*_334	16pk	-	334	362	SAIWNGPMGVFEMVPYSKGTFAIAKAMGR	EEEEES-SS-TTSGGG-HHHHHHHHHHHH	bbbbbMxabxaabaaaaaaaaaaaaaaaa
1php_*_312	1php	-	312	340	LVVWNGPMGVFEMDAFAHGTKAIAEALAE	EEEEES-SS-TTSGGG-HHHHHHHHHHHH	bbbbbepabxaabaaaaaaaaaaaaaaaa
1qpg_*_330	1qpg	-	330	358	TIVWNGPPGVFEFEKFAAGTKALLDEVVK	EEEEES-SS-TTSGGG-HHHHHHHHHHHH	bbbbbexabxaabaaaaaaaaaaaaaaaa
1vpe_*_313	1vpe	-	313	341	TVVWNGPMGVFEIDDFAEGTKQVALAIAA	EEEEES-SS-TTSGGG-HHHHHHHHHHHH	bbbbbexabxaaxaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	N - 338
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	G - 339
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	P - 340
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	M - 341
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	G - 342
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	V - 343
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	F - 344
16pk_*_334	16pk	*	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	F - 344
16pk_*_334	16pk	*	BIS1,1,5,5-TETRAFLUOROPHOSPHOPENTYLPHOSPHONIC ACID ADENYLATE ESTER	E - 345
16pk_*_334	16pk	*	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	E - 345
16pk_*_334	16pk	*	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	M - 346
16pk_*_334	16pk	*	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	V - 347
16pk_*_334	16pk	*	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	P - 348
16pk_*_334	16pk	*	EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID	S - 350
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	N - 316
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	G - 317
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	P - 318
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	M - 319
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	G - 320
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	V - 321
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	F - 322
1php_*_312	1php	*	ADPADENOSINE-5'-DIPHOSPHATE	E - 323
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	N - 334
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	G - 335
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	P - 336
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	P - 337
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	G - 338
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	V - 339
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	F - 340
1qpg_*_330	1qpg	*	MAPMAGNESIUM-5'-ADENYLY-IMIDO-TRIPHOSPHATE	E - 341
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	N - 317
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	G - 318
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	P - 319
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	M - 320
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	G - 321
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	V - 322
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	F - 323
1vpe_*_313	1vpe	*	ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER	E - 324

Clusters included in this Subclass

CLUSTER: EH.11.0