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PDB code:

Information on SUBCLASS 7.1.1

Subclass Accession number: 5004 Subclass: 7.1.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 15 Average sequence ID (%) : 63.8 +/- 23.8 Average RMSD (Å) : 0.273 +/- 0.122 Consensus geometry d (Å): 21 delta (°): 135-180 theta (°): 90-135 rho (°): 0-45

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1aec_*_25	1aec	-	27	56	AFSAIATVEGINKIVTGVLISLSEQELIDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxbxaaaaaaa
1cqd_A_27	1cqd	A	29	58	AFSTVAAVEGINQIVTGDLISLSEQQLVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavxxbxbxaaaaaaa
1fh0_A_25	1fh0	A	27	56	AFSATGALEGQMFRKTGKLVSLSEQNLVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxxxaaaaaaa
1gec_E_25	1gec	E	27	56	AFSTVATVEGINKIKTGNLVELSEQELVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbbbxbxaaaaaaa
1iwd_A_25	1iwd	A	27	56	AFSAVAAVESINKIRTGQLISLSEQELVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbbbxbxaaaaaaa
1khq_A_25	1khq	A	27	56	AFSAVVTIEGIIKIRTGNLNEYSEQELLDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxbxaaaaaaa
1m6d_A_25	1m6d	A	27	56	AFSVTGNVEGQWFLNQGTLLSLSEQELLDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxxxaaaaaaa
1mem_A_25	1mem	A	27	56	AFSSVGALEGQLKKKTGKLLNLSPQNLVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbbbxxxaaaaaaa
1ms6_A_25	1ms6	A	27	56	AFSAVGALEAQLKLKTGKLVSLSAQNLVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbbbxbxaaaaaaa
1o0e_A_25	1o0e	A	27	56	AFSTVSTVESINQIRTGNLISLSEQELVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxbxaaaaaaa
1ppo_*_25	1ppo	-	27	56	AFSAVATVEGINKIRTGKLVELSEQELVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxbxaaaaaaa
1s4v_A_26	1s4v	A	28	57	AFSTIVAVEGINQIKTNKLVSLSEQELVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxbxaaaaaaa
1yal_*_27	1yal	-	27	56	AFSTIATVEGINKIVTGNLLELSEQELVDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbbbxxxaaaaaaa
2act_*_25	2act	-	27	56	AFSAIATVEGINKITSGSLISLSEQELIDC	HHHHHHHHHHHHHHHHS----B-HHHHHHH	aaaaaaaaaaaaaaaavbxbxbxaaaaaaa
8pch_A_25	8pch	A	27	56	TFSTTGALESAVAIATGKMLSLAEQQLVDC	HHHHHHHHHHHHHHHH-----B-HHHHHHH	aaaaaaaaaaaaaaaavxbbbxxaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1aec_*_25	1aec	*	E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE	C - 25
1aec_*_25	1aec	*	E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE	W - 26
1aec_*_25	1aec	*	E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE	A - 27
1cqd_A_27	1cqd	A	THJTETRATHIONATE	C - 27
1cqd_A_27	1cqd	A	THJTETRATHIONATE	W - 28
1fh0_A_25	1fh0	A	NFP3-AMINO-5-PHENYLPENTANE	C - 25
1fh0_A_25	1fh0	A	BNSBENZENESULFONYL	C - 25
1fh0_A_25	1fh0	A	ODS4-METHYLPIPERAZIN-1-YL CARBONYL GROUP	W - 26
1fh0_A_25	1fh0	A	NFP3-AMINO-5-PHENYLPENTANE	W - 26
1gec_E_25	1gec	E	GCMGLYCYLMETHYLENE GROUP	C - 25
1gec_E_25	1gec	E	GCMGLYCYLMETHYLENE GROUP	W - 26
1iwd_A_25	1iwd	A	THJTETRATHIONATE	C - 25
1iwd_A_25	1iwd	A	THJTETRATHIONATE	W - 26
1khq_A_25	1khq	A	GLM1-AMINO-PROPAN-2-ONE	C - 25
1khq_A_25	1khq	A	GLM1-AMINO-PROPAN-2-ONE	W - 26
1m6d_A_25	1m6d	A	MYP4-MORPHOLIN-4-YL-PIPERIDINE-1-CARBOXYLIC ACID [1-(3-BENZENESULFONYL-1-PROPYL-ALLYLCARBAMOYL)-2-PHENYLETHYL]-AMIDE	C - 25
1m6d_A_25	1m6d	A	MYP4-MORPHOLIN-4-YL-PIPERIDINE-1-CARBOXYLIC ACID [1-(3-BENZENESULFONYL-1-PROPYL-ALLYLCARBAMOYL)-2-PHENYLETHYL]-AMIDE	W - 26
1mem_A_25	1mem	A	BZPN1-CARBOXYPIPERAZINE	W - 26
1ms6_A_25	1ms6	A	BLNMORPHOLINE-4-CARBOXYLIC ACID [1S-(2-BENZYLOXY-1R-CYANO -ETHYLCARBAMOYL)-3-METHYL-BUTYL]AMIDE	C - 25
1ms6_A_25	1ms6	A	BLNMORPHOLINE-4-CARBOXYLIC ACID [1S-(2-BENZYLOXY-1R-CYANO -ETHYLCARBAMOYL)-3-METHYL-BUTYL]AMIDE	W - 26
1ppo_*_25	1ppo	*	HGMERCURY (II) ION	C - 25
1ppo_*_25	1ppo	*	HGMERCURY (II) ION	W - 26
1s4v_A_26	1s4v	A	LYMDEOXY-METHYL-LYSINE	C - 26
1s4v_A_26	1s4v	A	LYMDEOXY-METHYL-LYSINE	W - 27
1yal_*_27	1yal	*	SCHS-METHYL THIOCYSTEINE GROUP	A - 27
1yal_*_27	1yal	*	SCHS-METHYL THIOCYSTEINE GROUP	F - 28
1yal_*_27	1yal	*	SCHS-METHYL THIOCYSTEINE GROUP	S - 29
1yal_*_27	1yal	*	SCHS-METHYL THIOCYSTEINE GROUP	T - 30
2act_*_25	2act	*	CYATWO OXYGEN ATOMS BOUND TO SG OF CYS	C - 25
2act_*_25	2act	*	CYATWO OXYGEN ATOMS BOUND TO SG OF CYS	W - 26
2act_*_25	2act	*	CYATWO OXYGEN ATOMS BOUND TO SG OF CYS	A - 27

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1cqd_A_27	1cqd	A	CAACYS 27 AND HIS 161 ARE THE CATALYTIC DIAD.	C - 27
1mem_A_25	1mem	A	CATDESCRIPTION NOT PROVIDED	C - 25

Clusters included in this Subclass

CLUSTER: HH.6.14

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