Information on SUBCLASS 7.6.1 |
Subclass Accession number: 5009
Subclass: 7.6.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 59.3 +/- 22.1 Average RMSD (Å) : 0.450 +/- 0.084 Consensus geometry
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Consensus Sequence: | DhcGYXchXLP |
(φψ)-conformation: | aapgpllppaa |
Pattern: | [K] | [C] | [AEK] | [LV] | x | [HQR] | [aekn] | [IL] | [KNY] | [D] | [IL] | [ADK] | [DG] | [Y] | [GQR] | [DGR] | [IV] | [AST] | [L] | [LP] | [E] | [LW] | [AILV] | [C] | [ITV] | [AILMT] | [F] | [H] | [IT] | [S] |
Conservation: | 0.640 | 2.265 | -0.767 | -0.376 | -0.795 | -0.444 | -1.349 | -0.126 | -0.885 | 1.047 | -0.172 | -1.012 | -0.183 | 1.453 | -0.932 | -0.951 | 0.043 | -0.597 | 0.234 | -0.481 | 0.640 | 0.288 | -0.754 | 2.265 | -0.626 | -1.059 | 1.047 | 1.859 | -0.507 | 0.234 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1alc_*_5 | 1alc | - | 5 | 34 | KCELSQNLYDIDGYGRIALPELICTMFHTS | HHHHHHHTGGGTTGGG--HHHHHHHHHHHH | aaaaaaaaaaapvxvvxxaaaaaaaaaaaN |
1b9o_A_5 | 1b9o | A | 5 | 34 | KCELSQLLKDIDGYGGIALPELICTMFHTS | HHHHHHHTGGGTTGGG--HHHHHHHHHHHH | aaaaaaaaaaapvpvvbxaaaaaaaaaaaa |
1f6r_A_5 | 1f6r | A | 5 | 34 | KCEVFRELKDLKGYGGVSLPEWVCTTFHTS | HHHHHHHTGGGTTGGG--HHHHHHHHHHHH | aaaaaaaaaaapvpvvbxaaaaaaaaaaaa |
1fkq_A_5 | 1fkq | A | 5 | 34 | KCEVFQKLKDLKDYGGVSLPEWVCVAFHTS | HHHHHHHTGGGTTBTTB-HHHHHHHHHHHH | aaaaaaaaaaapvxvvxxaaaaaaaaaaaa |
1hfx_*_5 | 1hfx | - | 5 | 34 | KCALSHELNDLAGYRDITLPEWLCIIFHIS | HHHHHHHTTTTTTGGG--HHHHHHHHHHHH | aaaaaaaaaaapgxllxxaaaaaaaaaaaa |
1nmm_A_5 | 1nmm | A | 5 | 34 | KCKVSHAIKDIDGYQGISLLEWACVLFHTS | HHHHHHHTGGGTTGGG--HHHHHHHHHHHH | aaaaaaaaaaapvxlvbxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nmm_A_5 | 1nmm | A | NAGN-ACETYL-D-GLUCOSAMINE | F - 31 |
1nmm_A_5 | 1nmm | A | NAGN-ACETYL-D-GLUCOSAMINE | H - 32 |
1nmm_A_5 | 1nmm | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 33 |
Clusters included in this Subclass |
CLUSTER: HH.10.15 |