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Information on SUBCLASS 8.6.1
Subclass Accession number: 5034
Subclass: 8.6.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 27.5 +/- 30.4
Average RMSD (Å) : 0.950 +/- 0.569

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hXphchpXXppX
(φψ)-conformation: aabaapppppaa
Pattern: [FIV][LT][AKQ][AGV][EF][NS][APS]x[AGV][ER][ADV][KL][DNST][ad][AGKT][DE][IT]
Conservation:0.5300.223-0.211-0.7390.1531.379-0.205-0.310-0.6401.208-1.284-0.287-0.099-1.353-1.2912.3650.561
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bu3_*_661bu3   -6682FLQVFSAGARALTDAETHHHHHSTT-----HHHHaaaaabaaxxxxxaaaa
1exm_A_241exm   A3450VTAAENPNVEVKDYGDIHHHHH-TT-----HHHHaaaaabaaxxxbxaaaa
1rwy_A_661rwy   A6682ILKGFSSDARDLSAKETHHHHH-TT-----HHHHaaaaabaaxxxxxaaaa
5pal_*_665pal   -6682VLKGFSAHGRDLNDTETHHHHH-TT-----HHHHaaaaabaaxbxxxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bu3_*_661bu3   *     CACALCIUM ION G - 89
1exm_A_241exm   A     MGMAGNESIUM ION K - 24
1exm_A_241exm   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER K - 24
1exm_A_241exm   A     MGMAGNESIUM ION T - 25
1exm_A_241exm   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 25
1exm_A_241exm   A     MGMAGNESIUM ION T - 26
1exm_A_241exm   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER T - 26
1exm_A_241exm   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER L - 27
1exm_A_241exm   A     MGMAGNESIUM ION Y - 47
1exm_A_241exm   A     GNPPHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER Y - 47

Clusters included in this Subclass
CLUSTER: HH.7.98