Information on SUBCLASS 8.11.1 |
Subclass Accession number: 5040
Subclass: 8.11.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 56.5 +/- 21.8 Average RMSD (Å) : 0.260 +/- 0.089 Consensus geometry
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Consensus Sequence: | hpchcGhpAWVA |
(φψ)-conformation: | aapaaeaaapaa |
Pattern: | [ADT] | [ADV] | [ADS] | [IV] | [ANRS] | [C] | [A] | [K] | [KR] | [IV] | [AV] | [krs] | [DG] | [GP] | [KNQ] | [G] | [IM] | [GNRS] | [A] | [W] | [KV] | [A] | [W] | x | [kn] | [HR] |
Conservation: | -0.780 | -0.991 | -0.737 | 0.020 | -0.870 | 1.897 | 0.191 | 0.532 | 0.059 | 0.033 | -0.439 | -0.958 | -0.230 | -0.248 | -0.420 | 0.873 | -0.203 | -0.812 | 0.191 | 2.579 | -0.674 | 0.191 | 2.579 | -0.820 | -0.901 | -0.065 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jse_*_89 | 1jse | - | 89 | 114 | TASVNCAKKIASGGNGMNAWVAWRNR | HHHHHHHHHHHTSTTGGGGSHHHHHH | aaaaaaaaaaaaxaaeaaaxaaaaaa |
1jsf_*_90 | 1jsf | - | 90 | 115 | ADAVACAKRVVRDPQGIRAWVAWRNR | HHHHHHHHHHHTSTTGGGGSHHHHHH | aaaaaaaaaaaaxaaeaaaxaaaaaa |
1lmq_*_89 | 1lmq | - | 89 | 114 | TVAIRCAKRVVLDPNGIGAWVAWRLH | HHHHHHHHHHTTSTTGGGG-HHHHHH | aaaaaaaaaaaaxaaeaaaxaaaaaa |
1qqy_A_89 | 1qqy | A | 89 | 114 | DDDIACAKRVVKDPNGMSAWVAWVKH | HHHHHHHHHHTTSTTGGGGSHHHHHH | aaaaaaaaaaaaxaaeaaabaaaaaa |
2eql_*_89 | 2eql | - | 89 | 114 | DDDISCAKRVVRDPKGMSAWKAWVKH | HHHHHHHHHHTTSTTGGGG-HHHHHH | aaaaaaaaaaaaxaaeaaabaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | R - 97 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 98 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | D - 101 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | P - 102 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | N - 103 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | A - 107 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | W - 108 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | V - 109 |
1lmq_*_89 | 1lmq | * | NAGN-ACETYL-D-GLUCOSAMINE | A - 110 |
Clusters included in this Subclass |
CLUSTER: HH.9.25 |