Information on SUBCLASS 8.14.1 |
Subclass Accession number: 5043
Subclass: 8.14.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 17.3 +/- 16.3 Average RMSD (Å) : 0.650 +/- 0.208 Consensus geometry
|
Consensus Sequence: | phXpppcphDXX |
(φψ)-conformation: | aappaalbbpaa |
Pattern: | x | x | [ILMY] | [FI] | x | [KQRS] | [VY] | [AST] | [DGRS] | [EQRS] | [DT] | [DG] | x | [CIM] | [D] | x | [DPR] | [ENRS] | [FL] | x | x | [CLM] | [LM] | x | [DEQR] | x |
Conservation: | -1.184 | -1.272 | -0.041 | 1.324 | -0.393 | 0.003 | 0.567 | 0.240 | -0.700 | -0.085 | 0.483 | 1.135 | -0.832 | 0.123 | 3.124 | -1.008 | -0.270 | -0.217 | 0.698 | -1.404 | -0.832 | 0.630 | 1.205 | -0.920 | 0.091 | -0.465 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eg3_A_211 | 1eg3 | A | 216 | 241 | RYLFKQVASSTGFCDQRRLGLLLHDS | HHHHHHHS-TTS-B-HHHHHHHHHHH | aaaaaaaxxaavbbxaaaaaaaaaaa |
1gjy_A_36 | 1gjy | A | 36 | 61 | YGYFASVAGQDGQIDADELQRCLTQS | HHHHHHH--TTS-B-HHHHHHHHHHH | aaaaaaapxaalbbxaaaaaaaaaaa |
1np8_A_123 | 1np8 | A | 127 | 152 | SMIIRRYSDETGNMDFDNFISCLVRL | HHHHHHH--TTS-B-HHHHHHHHHHH | aaaaaaabxaavbbxaaaaaaaaaaa |
1psr_A_4 | 1psr | A | 13 | 38 | IDMFHKYTRRDDKIDKPSLLTMMKEN | HHHHHHT--TTS-B-HHHHHHHHHHH | aaaaaaaxxaavbbxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1np8_A_123 | 1np8 | A | CDCADMIUM ION | N - 139 |
1np8_A_123 | 1np8 | A | CDCADMIUM ION | D - 141 |
1np8_A_123 | 1np8 | A | CDCADMIUM ION | F - 142 |
1np8_A_123 | 1np8 | A | CDCADMIUM ION | D - 143 |
1np8_A_123 | 1np8 | A | CDCADMIUM ION | N - 144 |
1psr_A_4 | 1psr | A | HOHOLMIUM ATOM | K - 25 |
Clusters included in this Subclass |
CLUSTER: HH.8.60 |