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Information on SUBCLASS 9.2.1
Subclass Accession number: 5067
Subclass: 9.2.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 19

Average sequence ID (%) : 32.9 +/- 23.7
Average RMSD (Å) : 0.447 +/- 0.204

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhDXcXpGXhXXp
(φψ)-conformation: aapaalalbbpaa
Pattern: [afilmv][FILMV][adekqrs]x[afgilmvy][D]x[CDKNQS][aegknqrst][DNQRST][GK]x[CILV][ADEGS]x[DENQS][DES][FLV]
Conservation:-0.1900.242-0.398-1.211-0.8862.741-0.829-0.153-0.751-0.1521.265-1.0020.531-0.231-0.9700.2711.2100.513
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4p_A_501a4p   A5471IMKDLDQCRDGKVGFQSFHHHHH-TTSSS-B-HHHHaaaaaxaalaUbxxaaaa
1alv_A_1391alv   A145162MVAVMDSDTTGKLGFEEFHHHHH-TT-SSSB-HHHHaaaaaxaalavbxxaaaa
1dtl_A_541dtl   A6077MIDEVDEDGSGTVDFDEFHHHHH-TTSSSSB-HHHHaaaaaxaalavbbxaaaa
1g33_A_401g33   A4663VFHILDKDKSGFIEEDELHHHHH-TT-SSSB-HHHHaaaaaxaalavbxxaaaa
1g33_A_791g33   A85102LMAAGDKDGDGKIGVEEFHHHHH-TT-SSSB-HHHHaaaaaxaavavbbxaaaa
1hqv_A_1281hqv   A134151LIRKFDRQGRGQIAFDDFHHHHH-SS-SS-B-HHHHaaaaaxaavavbxxaaaa
1hqv_A_251hqv   A3148VFQRVDKDRSGVISDNELHHHHH-TT--SSB-HHHHaaaaaxaalavbxxaaaa
1hqv_A_821hqv   A98115VFRTYDRDNSGMIDKNELHHHHH-TT--SSB-HHHHaaaaaxaalavbxxaaaa
1irj_A_561irj   A6279IMEDLDTNADKQLSFEEFHHHHH-TT-SS-B-HHHHaaaaaxaalavbbxaaaa
1mho_*_501mho   -5673VMETLDSDGDGECDFQEFHHHHH-SS-SSSB-HHHHaaaaaxaalavbbxaaaa
1ncx_*_1311ncx   -137154LMKDSDKNNDGRIDFDEFHHHHH-TT-SSSB-HHHHaaaaaxaalavbbxaaaa
1omr_A_1021omr   A105122AFSLYDVDGNGTISKNEVHHHHH-TT-SSSB-HHHHaaaaaxaavavbbbaaaa
1psr_A_571psr   A5774VFEKKDKNEDKKIDFSEFHHHHH-TT-SS-B-HHHHaaaaaxaalavbbxaaaa
1pva_A_401pva   A4663VFKAIDADASGFIEEEELHHHHH-TT-SSSB-HHHHaaaaaxaalavbxbaaaa
1pva_A_791pva   A85102FLKAADKDGDGKIGIDEFHHHHH-TT-SSSB-HHHHaaaaaxaavavbbxaaaa
1qls_A_561qls   A6178MMKKLDLDSDGQLDFQEFHHHHH-TT-SSSB-HHHHaaaaaxaalavbbxaaaa
1uhn_A_1201uhn   A127144SFQLYDLKQQGFIERQEVHHHHH-TT-SSSB-HHHHaaaaaxaalavbbbaaaa
1uhn_A_841uhn   A90107VFDLFDTKHNGILGFEEFHHHHH-TTSSS-B-HHHHaaaaaxaavavbbxaaaa
2sas_*_1032sas   -110127LFKGMDVSGDGIVDLEEFHHHHH-TTSSS---HHHHaaaaaxaavavbbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1alv_A_1391alv   A     CACALCIUM ION D - 140
1alv_A_1391alv   A     CACALCIUM ION R - 143
1alv_A_1391alv   A     CACALCIUM ION M - 149
1alv_A_1391alv   A     CACALCIUM ION D - 150
1alv_A_1391alv   A     CACALCIUM ION S - 151
1alv_A_1391alv   A     CACALCIUM ION D - 152
1alv_A_1391alv   A     CACALCIUM ION T - 153
1alv_A_1391alv   A     CACALCIUM ION T - 154
1alv_A_1391alv   A     CACALCIUM ION G - 155
1alv_A_1391alv   A     CACALCIUM ION K - 156
1alv_A_1391alv   A     CACALCIUM ION L - 157
1alv_A_1391alv   A     CACALCIUM ION G - 158
1alv_A_1391alv   A     CACALCIUM ION E - 161
1alv_A_1391alv   A     CACALCIUM ION F - 179
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE E - 56
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE L - 57
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE M - 60
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE I - 61
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE E - 63
1dtl_A_541dtl   A     CACALCIUM ION V - 64
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE V - 64
1dtl_A_541dtl   A     CACALCIUM ION D - 65
1dtl_A_541dtl   A     CACALCIUM ION E - 66
1dtl_A_541dtl   A     CACALCIUM ION D - 67
1dtl_A_541dtl   A     CACALCIUM ION G - 68
1dtl_A_541dtl   A     CACALCIUM ION S - 69
1dtl_A_541dtl   A     CACALCIUM ION G - 70
1dtl_A_541dtl   A     CACALCIUM ION T - 71
1dtl_A_541dtl   A     CACALCIUM ION V - 72
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE V - 72
1dtl_A_541dtl   A     CACALCIUM ION D - 73
1dtl_A_541dtl   A     CACALCIUM ION E - 76
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE F - 77
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE M - 80
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE M - 81
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE R - 83
1dtl_A_541dtl   A     BEP1-ISOBUTOXY-2-PYRROLIDINO-3[N-BENZYLANILINO] PROPANE S - 84
1g33_A_401g33   A     CACALCIUM ION L - 50
1g33_A_401g33   A     CACALCIUM ION D - 51
1g33_A_401g33   A     CACALCIUM ION K - 52
1g33_A_401g33   A     CACALCIUM ION D - 53
1g33_A_401g33   A     CACALCIUM ION K - 54
1g33_A_401g33   A     CACALCIUM ION S - 55
1g33_A_401g33   A     CACALCIUM ION G - 56
1g33_A_401g33   A     CACALCIUM ION F - 57
1g33_A_401g33   A     CACALCIUM ION I - 58
1g33_A_401g33   A     CACALCIUM ION E - 59
1g33_A_401g33   A     CACALCIUM ION D - 61
1g33_A_401g33   A     CACALCIUM ION E - 62
1g33_A_791g33   A     CACALCIUM ION G - 89
1g33_A_791g33   A     CACALCIUM ION D - 90
1g33_A_791g33   A     CACALCIUM ION K - 91
1g33_A_791g33   A     CACALCIUM ION D - 92
1g33_A_791g33   A     CACALCIUM ION G - 93
1g33_A_791g33   A     CACALCIUM ION D - 94
1g33_A_791g33   A     CACALCIUM ION G - 95
1g33_A_791g33   A     CACALCIUM ION K - 96
1g33_A_791g33   A     CACALCIUM ION I - 97
1g33_A_791g33   A     CACALCIUM ION G - 98
1g33_A_791g33   A     CACALCIUM ION E - 101
1hqv_A_251hqv   A     CACALCIUM ION V - 35
1hqv_A_251hqv   A     CACALCIUM ION D - 36
1hqv_A_251hqv   A     CACALCIUM ION K - 37
1hqv_A_251hqv   A     CACALCIUM ION D - 38
1hqv_A_251hqv   A     CACALCIUM ION R - 39
1hqv_A_251hqv   A     CACALCIUM ION S - 40
1hqv_A_251hqv   A     CACALCIUM ION G - 41
1hqv_A_251hqv   A     CACALCIUM ION V - 42
1hqv_A_251hqv   A     CACALCIUM ION I - 43
1hqv_A_251hqv   A     CACALCIUM ION S - 44
1hqv_A_251hqv   A     CACALCIUM ION E - 47
1hqv_A_821hqv   A     CACALCIUM ION R - 100
1hqv_A_821hqv   A     CACALCIUM ION T - 101
1hqv_A_821hqv   A     CACALCIUM ION Y - 102
1hqv_A_821hqv   A     CACALCIUM ION D - 103
1hqv_A_821hqv   A     CACALCIUM ION R - 104
1hqv_A_821hqv   A     CACALCIUM ION D - 105
1hqv_A_821hqv   A     CACALCIUM ION N - 106
1hqv_A_821hqv   A     CACALCIUM ION S - 107
1hqv_A_821hqv   A     CACALCIUM ION G - 108
1hqv_A_821hqv   A     CACALCIUM ION M - 109
1hqv_A_821hqv   A     CACALCIUM ION I - 110
1hqv_A_821hqv   A     CACALCIUM ION D - 111
1hqv_A_821hqv   A     CACALCIUM ION E - 114
1hqv_A_1281hqv   A     CACALCIUM ION Q - 145
1hqv_A_1281hqv   A     CACALCIUM ION Y - 168
1irj_A_561irj   A     CACALCIUM ION L - 66
1irj_A_561irj   A     CACALCIUM ION T - 68
1irj_A_561irj   A     CACALCIUM ION N - 69
1irj_A_561irj   A     CACALCIUM ION A - 70
1irj_A_561irj   A     CACALCIUM ION D - 71
1irj_A_561irj   A     CACALCIUM ION K - 72
1irj_A_561irj   A     CACALCIUM ION Q - 73
1irj_A_561irj   A     CACALCIUM ION L - 74
1irj_A_561irj   A     CACALCIUM ION S - 75
1irj_A_561irj   A     CACALCIUM ION E - 78
1mho_*_501mho   *     CACALCIUM ION L - 60
1mho_*_501mho   *     CACALCIUM ION S - 62
1mho_*_501mho   *     CACALCIUM ION D - 63
1mho_*_501mho   *     CACALCIUM ION G - 64
1mho_*_501mho   *     CACALCIUM ION G - 66
1mho_*_501mho   *     CACALCIUM ION E - 67
1mho_*_501mho   *     CACALCIUM ION C - 68
1mho_*_501mho   *     CACALCIUM ION D - 69
1mho_*_501mho   *     CACALCIUM ION E - 72
1ncx_*_1311ncx   *     CDCADMIUM ION S - 141
1ncx_*_1311ncx   *     CDCADMIUM ION D - 142
1ncx_*_1311ncx   *     CDCADMIUM ION K - 143
1ncx_*_1311ncx   *     CDCADMIUM ION N - 144
1ncx_*_1311ncx   *     CDCADMIUM ION N - 145
1ncx_*_1311ncx   *     CDCADMIUM ION D - 146
1ncx_*_1311ncx   *     CDCADMIUM ION G - 147
1ncx_*_1311ncx   *     CDCADMIUM ION R - 148
1ncx_*_1311ncx   *     CDCADMIUM ION I - 149
1ncx_*_1311ncx   *     CDCADMIUM ION D - 150
1ncx_*_1311ncx   *     CDCADMIUM ION E - 153
1omr_A_1021omr   A     CACALCIUM ION Y - 109
1omr_A_1021omr   A     CACALCIUM ION D - 110
1omr_A_1021omr   A     CACALCIUM ION V - 111
1omr_A_1021omr   A     CACALCIUM ION D - 112
1omr_A_1021omr   A     CACALCIUM ION G - 113
1omr_A_1021omr   A     CACALCIUM ION N - 114
1omr_A_1021omr   A     CACALCIUM ION G - 115
1omr_A_1021omr   A     CACALCIUM ION T - 116
1omr_A_1021omr   A     CACALCIUM ION I - 117
1omr_A_1021omr   A     CACALCIUM ION S - 118
1omr_A_1021omr   A     CACALCIUM ION E - 121
1psr_A_571psr   A     HOHOLMIUM ATOM K - 61
1psr_A_571psr   A     HOHOLMIUM ATOM D - 62
1psr_A_571psr   A     HOHOLMIUM ATOM K - 63
1psr_A_571psr   A     HOHOLMIUM ATOM N - 64
1psr_A_571psr   A     HOHOLMIUM ATOM E - 65
1psr_A_571psr   A     HOHOLMIUM ATOM D - 66
1psr_A_571psr   A     HOHOLMIUM ATOM K - 67
1psr_A_571psr   A     HOHOLMIUM ATOM K - 68
1psr_A_571psr   A     HOHOLMIUM ATOM I - 69
1psr_A_571psr   A     HOHOLMIUM ATOM D - 70
1psr_A_571psr   A     HOHOLMIUM ATOM E - 73
1pva_A_401pva   A     CACALCIUM ION I - 50
1pva_A_401pva   A     CACALCIUM ION A - 52
1pva_A_401pva   A     CACALCIUM ION A - 54
1pva_A_791pva   A     CACALCIUM ION A - 89
1qls_A_561qls   A     CACALCIUM ION L - 65
1qls_A_561qls   A     CACALCIUM ION D - 66
1qls_A_561qls   A     CACALCIUM ION L - 67
1qls_A_561qls   A     CACALCIUM ION D - 68
1qls_A_561qls   A     CACALCIUM ION D - 70
1qls_A_561qls   A     CACALCIUM ION G - 71
1qls_A_561qls   A     CACALCIUM ION Q - 72
1qls_A_561qls   A     CACALCIUM ION L - 73
1qls_A_561qls   A     CACALCIUM ION D - 74
1qls_A_561qls   A     CACALCIUM ION E - 77
2sas_*_1032sas   *     CACALCIUM ION M - 114
2sas_*_1032sas   *     CACALCIUM ION D - 115
2sas_*_1032sas   *     CACALCIUM ION V - 116
2sas_*_1032sas   *     CACALCIUM ION S - 117
2sas_*_1032sas   *     CACALCIUM ION G - 118
2sas_*_1032sas   *     CACALCIUM ION D - 119
2sas_*_1032sas   *     CACALCIUM ION G - 120
2sas_*_1032sas   *     CACALCIUM ION I - 121
2sas_*_1032sas   *     CACALCIUM ION V - 122
2sas_*_1032sas   *     CACALCIUM ION D - 123
2sas_*_1032sas   *     CACALCIUM ION E - 126
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1psr_A_571psr   A HOCA2+ BINDING SITE CONTAINING HO3+.D - 62
1psr_A_571psr   A HOCA2+ BINDING SITE CONTAINING HO3+.N - 64
1psr_A_571psr   A HOCA2+ BINDING SITE CONTAINING HO3+.E - 73
1qls_A_561qls   A CA2A NON-CANONICAL CALCIUM-BINDING EF-HANDD - 66
1qls_A_561qls   A CA2A NON-CANONICAL CALCIUM-BINDING EF-HANDD - 68
1qls_A_561qls   A CA2A NON-CANONICAL CALCIUM-BINDING EF-HANDD - 70
1qls_A_561qls   A CA2A NON-CANONICAL CALCIUM-BINDING EF-HANDQ - 72
1qls_A_561qls   A CA2A NON-CANONICAL CALCIUM-BINDING EF-HANDE - 77

Clusters included in this Subclass
CLUSTER: HH.8.0