Information on SUBCLASS 9.2.1 |
Subclass Accession number: 5067
Subclass: 9.2.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 19 Average sequence ID (%) : 32.9 +/- 23.7 Average RMSD (Å) : 0.447 +/- 0.204 Consensus geometry
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Consensus Sequence: | XhDXcXpGXhXXp |
(φψ)-conformation: | aapaalalbbpaa |
Pattern: | [afilmv] | [FILMV] | [adekqrs] | x | [afgilmvy] | [D] | x | [CDKNQS] | [aegknqrst] | [DNQRST] | [GK] | x | [CILV] | [ADEGS] | x | [DENQS] | [DES] | [FLV] |
Conservation: | -0.190 | 0.242 | -0.398 | -1.211 | -0.886 | 2.741 | -0.829 | -0.153 | -0.751 | -0.152 | 1.265 | -1.002 | 0.531 | -0.231 | -0.970 | 0.271 | 1.210 | 0.513 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4p_A_50 | 1a4p | A | 54 | 71 | IMKDLDQCRDGKVGFQSF | HHHHH-TTSSS-B-HHHH | aaaaaxaalaUbxxaaaa |
1alv_A_139 | 1alv | A | 145 | 162 | MVAVMDSDTTGKLGFEEF | HHHHH-TT-SSSB-HHHH | aaaaaxaalavbxxaaaa |
1dtl_A_54 | 1dtl | A | 60 | 77 | MIDEVDEDGSGTVDFDEF | HHHHH-TTSSSSB-HHHH | aaaaaxaalavbbxaaaa |
1g33_A_40 | 1g33 | A | 46 | 63 | VFHILDKDKSGFIEEDEL | HHHHH-TT-SSSB-HHHH | aaaaaxaalavbxxaaaa |
1g33_A_79 | 1g33 | A | 85 | 102 | LMAAGDKDGDGKIGVEEF | HHHHH-TT-SSSB-HHHH | aaaaaxaavavbbxaaaa |
1hqv_A_128 | 1hqv | A | 134 | 151 | LIRKFDRQGRGQIAFDDF | HHHHH-SS-SS-B-HHHH | aaaaaxaavavbxxaaaa |
1hqv_A_25 | 1hqv | A | 31 | 48 | VFQRVDKDRSGVISDNEL | HHHHH-TT--SSB-HHHH | aaaaaxaalavbxxaaaa |
1hqv_A_82 | 1hqv | A | 98 | 115 | VFRTYDRDNSGMIDKNEL | HHHHH-TT--SSB-HHHH | aaaaaxaalavbxxaaaa |
1irj_A_56 | 1irj | A | 62 | 79 | IMEDLDTNADKQLSFEEF | HHHHH-TT-SS-B-HHHH | aaaaaxaalavbbxaaaa |
1mho_*_50 | 1mho | - | 56 | 73 | VMETLDSDGDGECDFQEF | HHHHH-SS-SSSB-HHHH | aaaaaxaalavbbxaaaa |
1ncx_*_131 | 1ncx | - | 137 | 154 | LMKDSDKNNDGRIDFDEF | HHHHH-TT-SSSB-HHHH | aaaaaxaalavbbxaaaa |
1omr_A_102 | 1omr | A | 105 | 122 | AFSLYDVDGNGTISKNEV | HHHHH-TT-SSSB-HHHH | aaaaaxaavavbbbaaaa |
1psr_A_57 | 1psr | A | 57 | 74 | VFEKKDKNEDKKIDFSEF | HHHHH-TT-SS-B-HHHH | aaaaaxaalavbbxaaaa |
1pva_A_40 | 1pva | A | 46 | 63 | VFKAIDADASGFIEEEEL | HHHHH-TT-SSSB-HHHH | aaaaaxaalavbxbaaaa |
1pva_A_79 | 1pva | A | 85 | 102 | FLKAADKDGDGKIGIDEF | HHHHH-TT-SSSB-HHHH | aaaaaxaavavbbxaaaa |
1qls_A_56 | 1qls | A | 61 | 78 | MMKKLDLDSDGQLDFQEF | HHHHH-TT-SSSB-HHHH | aaaaaxaalavbbxaaaa |
1uhn_A_120 | 1uhn | A | 127 | 144 | SFQLYDLKQQGFIERQEV | HHHHH-TT-SSSB-HHHH | aaaaaxaalavbbbaaaa |
1uhn_A_84 | 1uhn | A | 90 | 107 | VFDLFDTKHNGILGFEEF | HHHHH-TTSSS-B-HHHH | aaaaaxaavavbbxaaaa |
2sas_*_103 | 2sas | - | 110 | 127 | LFKGMDVSGDGIVDLEEF | HHHHH-TTSSS---HHHH | aaaaaxaavavbbxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.8.0 |