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Information on SUBCLASS 9.2.2
Subclass Accession number: 5068
Subclass: 9.2.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004175 (>75 %)  GO:0004197 (>75 %)  GO:0005509 (>75 %)  GO:0008233 (>75 %)  GO:0008234 (>75 %)  
SCOP : 47472 (>75 %)  47473 (>75 %)  63550 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 52.8 +/- 28.6
Average RMSD (Å) : 1.000 +/- 0.245

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhDpDppGphGXp
(φψ)-conformation: aapaalalbbpaa
Pattern: [I][DK][KRT][CW][QR][AGS][IM][VY][AK][qr][FM][D][STV][D][RT][ST][G][KT][IL][CG][s][ENS][E][FL][KP][GY][AL][FW][EN][AN]
Conservation:0.824-0.394-0.7600.9240.147-0.710-0.059-0.266-0.677-1.4390.0112.201-1.0272.201-0.536-0.0592.201-0.5360.141-0.330-0.942-0.6391.512-0.259-0.124-0.730-0.8831.202-0.053-0.942
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1alv_A_1591alv   A169198IKKWQAIYKQFDVDRSGTIGSSELPGAFEAHHHHHHHHHHH-TT--SSB-TTTHHHHHHHaaaaaaaaaaaxaalavbbxaaaaaaaaaa
1kfu_S_8411kfu   S841870IDTCRSMVAVMDSDTTGKLGFEEFKYLWNNHHHHHHHHHHH-SS--S-B-SHHHHHHHHHaaaaaaaaaaaxaavavbxxaaaaaaaaaa
1kfu_S_8621kfu   S871900IKRWQAIYKQFDTDRSGTICSSELPGAFEAHHHHHHHHHHS-TT-SSSB-GGGHHHHHHHaaaaaaaaaaabaalavbbpaaaaaaaaaa
1np8_A_771np8   A87116IKKWQGIYKRFDTDRSGTIGSNELPGAFEAHHHHHHHHHHH-TT-SSSB-TTTHHHHHHHaaaaaaaaaaaxaalavbbbaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1alv_A_1591alv   A     CACALCIUM ION E - 161
1alv_A_1591alv   A     CACALCIUM ION F - 179
1alv_A_1591alv   A     CACALCIUM ION D - 180
1alv_A_1591alv   A     CACALCIUM ION V - 181
1alv_A_1591alv   A     CACALCIUM ION D - 182
1alv_A_1591alv   A     CACALCIUM ION R - 183
1alv_A_1591alv   A     CACALCIUM ION S - 184
1alv_A_1591alv   A     CACALCIUM ION G - 185
1alv_A_1591alv   A     CACALCIUM ION T - 186
1alv_A_1591alv   A     CACALCIUM ION I - 187
1alv_A_1591alv   A     CACALCIUM ION G - 188
1alv_A_1591alv   A     CACALCIUM ION E - 191
1np8_A_771np8   A     CDCADMIUM ION E - 79
1np8_A_771np8   A     CDCADMIUM ION Q - 91
1np8_A_771np8   A     CDCADMIUM ION K - 95
1np8_A_771np8   A     CDCADMIUM ION F - 97
1np8_A_771np8   A     CDCADMIUM ION D - 98
1np8_A_771np8   A     CDCADMIUM ION T - 99
1np8_A_771np8   A     CDCADMIUM ION D - 100
1np8_A_771np8   A     CDCADMIUM ION R - 101
1np8_A_771np8   A     CDCADMIUM ION S - 102
1np8_A_771np8   A     CDCADMIUM ION G - 103
1np8_A_771np8   A     CDCADMIUM ION T - 104
1np8_A_771np8   A     CDCADMIUM ION I - 105
1np8_A_771np8   A     CDCADMIUM ION G - 106
1np8_A_771np8   A     CDCADMIUM ION N - 108
1np8_A_771np8   A     CDCADMIUM ION E - 109

Clusters included in this Subclass
CLUSTER: HH.11.66
CLUSTER: HH.12.28