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Information on SUBCLASS 9.2.3
Subclass Accession number: 5069
Subclass: 9.2.3 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005509 (>75 %)  
SCOP : 47472 (>75 %)  47473 (>75 %)  63550 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 37.8 +/- 27.7
Average RMSD (Å) : 0.700 +/- 0.271

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XhDpDXpGphXXp
(φψ)-conformation: aapaalalbbpaa
Pattern: [IL][DEN][AT][CW][KR]xx[FIV]x[MTV][LMV][D][QRS][D]x[ST][G][KT][LMV][EG][FH][EHN][AE][FL][KR][EQY][AL][IW][AGN][alv]
Conservation:0.373-0.009-0.0151.0340.682-1.620-0.443-0.331-0.813-0.621-0.1352.243-0.6212.243-1.6600.1082.243-0.341-0.096-0.2750.297-0.125-0.1020.2430.682-0.561-0.5760.619-0.847-1.579
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gjy_A_721gjy   A72101LETCRLMVSMLDRDMSGTMGFNEFKELWAVHHHHHHHHHHH-TT--S-B-HHHHHHHHHHaaaaaaaaaaaxaNlavbbxaaaaaaaaaa
1k94_A_1111k94   A121150LNAWKENFMTVDQDGSGTVEHHELRQAIGLHHHHHHHHHHH-TT--SB--HHHHHHHHHHaaaaaaaaaaaxaalavbbxaaaaaaaaaa
1k94_A_911k94   A91120LETCRIMIAMLDRDHTGKMGFNAFKELWAAHHHHHHHHHHH-TT-SS-B-HHHHHHHHHHaaaaaaaaaaaxaalavbbxaaaaaaaaaa
1kfu_S_8411kfu   S841870IDTCRSMVAVMDSDTTGKLGFEEFKYLWNNHHHHHHHHHHH-SS--S-B-SHHHHHHHHHaaaaaaaaaaaxaavavbxxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1k94_A_911k94   A     CACALCIUM ION K - 108
1k94_A_1111k94   A     CACALCIUM ION V - 131
1k94_A_1111k94   A     CACALCIUM ION D - 132
1k94_A_1111k94   A     CACALCIUM ION Q - 133
1k94_A_1111k94   A     CACALCIUM ION D - 134
1k94_A_1111k94   A     CACALCIUM ION G - 135
1k94_A_1111k94   A     CACALCIUM ION S - 136
1k94_A_1111k94   A     CACALCIUM ION G - 137
1k94_A_1111k94   A     CACALCIUM ION T - 138
1k94_A_1111k94   A     CACALCIUM ION V - 139
1k94_A_1111k94   A     CACALCIUM ION E - 140
1k94_A_1111k94   A     CACALCIUM ION E - 143

Clusters included in this Subclass
CLUSTER: HH.9.26