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Information on SUBCLASS 9.3.1
Subclass Accession number: 5070
Subclass: 9.3.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 65.2 +/- 23.6
Average RMSD (Å) : 0.287 +/- 0.113

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XXGhDcYpGhSLh
(φψ)-conformation: aalaplplgppaa
Pattern: [kr][cq][e][l][ac][akr][aknt][lm][kv][ars]x[g][lm][dn][gn][fy][hqr][g][iy][st][l][agp][n][w][mv][c][almt][as][efk][fhwy][e][s]
Conservation:0.076-0.1180.7130.288-0.225-0.680-1.118-0.045-0.694-0.885-1.2501.1380.0860.171-0.0140.769-0.956-0.306-1.119-0.2400.288-0.8721.1383.264-0.2162.414-1.035-0.264-1.041-0.2710.7130.288
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ghl_A_51ghl   A536RCELAAAMKRMGLDNYRGYSLGNWVCAAKFESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvxvvbxaaaaaaaaaaaa
1jse_*_51jse   -536RCELAAAMKRLGLDNYRGYSLGNWVCAAKFESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvxlvxxaaaaaaaaaaaN
1jsf_*_51jsf   -536RCELARTLKRLGMDGYRGISLANWMCLAKWESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvxlvbxaaaaaaaaaaaa
1jug_*_51jug   -536KQELCKNLVAQGMNGYQHITLPNWVCTAFHESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvxllxxaaaaaaaaaaaa
1lmq_*_51lmq   -536RCELARALKASGMDGYAGNSLPNWVCLSKWESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvxlvbxaaaaaaaaaaaa
1lsg_*_61lsg   -637RCELAAAMKRHGLDNYRGYSLGNWVCAAKFESHHHHHHHHHTTT-TTBTTB-THHHHHHHHHHHaaaaaaaaaaavaxvxlgxxaaaaaaaaaaaN
1qqy_A_51qqy   A536KCELARKLKSMGMDGFHGYSLANWVCMAEYESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvxvvxxaaaaaaaaaaaa
3lzt_*_53lzt   -536RCELAAAMKRHGLDNYRGYSLGNWVCAAKFESHHHHHHHHHHTT-TTBTTB-HHHHHHHHHHHHaaaaaaaaaaavaxvplvbpaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jse_*_51jse   *     POLN-PROPANOL N - 19
1jse_*_51jse   *     POLN-PROPANOL G - 22
1jse_*_51jse   *     POLN-PROPANOL Y - 23
1jse_*_51jse   *     POLN-PROPANOL S - 24
1jse_*_51jse   *     POLN-PROPANOL L - 25
1jse_*_51jse   *     POLN-PROPANOL N - 27
1lmq_*_51lmq   *     NAGN-ACETYL-D-GLUCOSAMINE E - 35
3lzt_*_53lzt   *     ACTACETATE ION G - 16
3lzt_*_53lzt   *     ACTACETATE ION Y - 20
3lzt_*_53lzt   *     ACTACETATE ION R - 21
3lzt_*_53lzt   *     ACTACETATE ION E - 35

Clusters included in this Subclass
CLUSTER: HH.11.6