Logo
Information on SUBCLASS 9.4.1
Subclass Accession number: 5071
Subclass: 9.4.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 48.7 +/- 26.0
Average RMSD (Å) : 0.613 +/- 0.336

Consensus geometry
d (Å): 25 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: hXXphhFhGppph
(φψ)-conformation: aagbpabppabaa
Pattern: [IV][D][ILVW][W][GS][ALV][G][CV][IV][FLM][AGY][E][LM][FILMV][cnrt][gr][KQRT][AILPT][ILP][F][kpr][GN][dqrst][DS][dehy][ailv][DR][q][FLW]xx[IV][FILM][dekr]
Conservation:0.4351.496-0.4723.6600.014-0.3871.4960.9420.419-0.113-0.6381.0630.429-0.369-1.066-0.522-0.350-1.000-0.5751.496-0.7410.478-1.0540.003-0.732-0.7600.108-0.155-0.375-1.343-0.8420.468-0.280-0.735
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1blx_A_1991blx   A200233VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDHHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHaaaaaaaaaaaaaaalbpabbxabaaaaaaaaaa
1cm8_A_2071cm8   A207240VDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKHHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHaaaaaaaaaaaaaaagbxabxxabaaaaaaaaaa
1gz8_A_1831gz8   A184217VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRHHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHaaaaaaaaaaaaaaavbpabwxabaaaaaaaaaa
1o6l_A_3311o6l   A331364VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMHHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHaaaaaaaaaaaaaaavbxabbbaxaaaaaaaaaa
1ob3_A_1811ob3   A182215IDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRHHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHaaaaaaaaaaaaaaagbxabwxabaaaaaaaaaa
1pmq_A_2441pmq   A244277VDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEHHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHaaaaaaaaaaaaaaavbpabwbabaaaaaaaaaa
1q41_A_2371q41   A238271IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKHHHHHHHHHHHHHHHSS-SS--SSHHHHHHHHHHaaaaaaaaaaaaaaavbpabxeabaaaaaaaaaa
1r3c_A_2031r3c   A204237VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRHHHHHHHHHHHHHHHSS-S---SSHHHHHHHHHHaaaaaaaaaaaaaaavbxabwxabaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cm8_A_2071cm8   A     PTRO-PHOSPHOTYROSINE S - 229
1cm8_A_2071cm8   A     PTRO-PHOSPHOTYROSINE D - 230
1cm8_A_2071cm8   A     PTRO-PHOSPHOTYROSINE H - 231
1pmq_A_2441pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER E - 255
1pmq_A_2441pmq   A     ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER I - 261

Clusters included in this Subclass
CLUSTER: HH.8.10