Logo
Information on SUBCLASS 9.12.1
Subclass Accession number: 5080
Subclass: 9.12.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.7 (>75 %)  2.7.7 (>75 %)  2.7.7.33.2 (>75 %)  3.2.1 (>75 %)  3.2.1.21
GO : GO:0004553 (>50 %)  GO:0004595 (>75 %)  GO:0015926 (>50 %)  GO:0016772 (>75 %)  GO:0016779 (>75 %)  GO:0016798 (>50 %)  
SCOP : 51445 (>75 %)  51521 (>75 %)  52373 (>75 %)  52374 (>75 %)  52397 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 36.2 +/- 24.9
Average RMSD (Å) : 0.500 +/- 0.141

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: ppcXphpphhPXX
(φψ)-conformation: aalppaaaabpaa
Pattern: [AS][ST][ILM][IV][KR][E]x[AL][QR][HNY][DGQ][EG][DS][CV][EST][DEHK][FL][LV][P][EP][AENP][TV]xx[AY][IL]x[AQ][KQ]
Conservation:0.1900.3280.1240.8540.9211.918-1.033-0.4750.5890.151-0.736-0.0970.039-0.030-0.550-0.6420.0310.1053.3810.038-1.3730.008-1.518-1.419-0.5400.522-0.962-0.4120.589
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1k4k_A_1811k4k   A181209ATIIRERLQNGESCEDLLPEPVLTYINQQHHHHHHHHHTT---TTTS-HHHHHHHHHHaaaaaaaaaavxxaaaabwaaaaaaaaaa
1o6b_A_1291o6b   A129157SSIVKEVARYDGSVSEFVPPEVELALQQKHHHHHHHHHTT---TTTS-HHHHHHHHHHaaaaaaaaaavxxaaaabwaaaaaaaaaa
1od6_A_1291od6   A129157STMVKEIARYGGDVSKLVPPATLRALKAKHHHHHHHHHTT---TTTS-HHHHHHHHHHaaaaaaaaaavxxaaaabxaaaaaaaaaa
1qjc_A_1291qjc   A129157SSLVKEVARHQGDVTHFLPENVHQALMAKHHHHHHHHHTT---GGGS-HHHHHHHHHHaaaaaaaaaavbxaaaabxaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1o6b_A_1291o6b   A     PO4PHOSPHATE ION S - 129
1o6b_A_1291o6b   A     ADPADENOSINE-5'-DIPHOSPHATE S - 129
1o6b_A_1291o6b   A     PO4PHOSPHATE ION S - 130
1o6b_A_1291o6b   A     MGMAGNESIUM ION A - 136
1o6b_A_1291o6b   A     MGMAGNESIUM ION D - 139
1o6b_A_1291o6b   A     MGMAGNESIUM ION G - 140
1o6b_A_1291o6b   A     MGMAGNESIUM ION Q - 155
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1od6_A_1291od6   A AC3SO4 BINDING SITE FOR CHAIN AS - 129

Clusters included in this Subclass
CLUSTER: HH.9.30