ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.16.1

Subclass Accession number: 5084
Subclass: 9.16.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.3 (>75 %)  2.3.3 (>75 %)  2.3.3.1 2.7.7 (>75 %)  2.7.7.3
GO : GO:0004108 (>75 %)  GO:0004595 (>50 %)  GO:0016746 (>75 %)  GO:0016779 (>50 %)  GO:0046912 (>75 %)
SCOP : 48255 (>75 %)  48256 (>75 %)  48257 (>75 %)  52373 (>75 %)  52374 (>75 %)  52397 (>75 %)

Number of loops: 3

Average sequence ID (%) : 96.7 +/- -91.8
Average RMSD (Å) : 0.133 +/- 0.058

Consensus geometry

d (Å): 19

delta (°): 135-180

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	EQGXAXNPWPNVD
(φψ)-conformation:	aalapabappbaa

Pattern:	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x	x
Conservation:	1.097	-0.081	0.508	-0.081	-0.670	-0.670	-0.670	-0.081	-0.670	1.097	-0.081	-0.670	-0.670	1.097	0.508	-0.670	-0.670	-0.670	-0.081	-0.081	0.508	-1.996	-0.670	-1.996	0.508	1.097	3.454	1.097	0.508	-0.670	0.508	-0.670	1.686	-0.670	0.508	-0.670	-0.670	-0.670	-0.081	1.097

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1csc_*_345	1csc	-	345	384	PMFKLVAQLYKIVPNVLLEQGAAANPWPNVDAHSGVLLQY	HHHHHHHHHHHHHHHHHHHHT--S--SB-THHHHHHHHHH	aaaaaaaaaaaaaaaaaaaavaxabaxxbaaaaaaaaaaa
1csh_*_345	1csh	-	345	384	PMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQY	HHHHHHHHHHHHHHHHHHHHT--S--SB-THHHHHHHHHH	aaaaaaaaaaaaaaaaaaaavaxabaxxbaaaaaaaaaaa
2cts_*_345	2cts	-	345	384	PMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQY	HHHHHHHHHHHHHHHHHHHTT--S--SB-THHHHHHHHHH	aaaaaaaaaaaaaaaaaaaavaxabaxxbaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	L - 361
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	Q - 364
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	A - 366
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	A - 367
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	A - 368
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	N - 369
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	N - 373
1csc_*_345	1csc	*	MALMALTOSE	N - 373
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	V - 374
1csc_*_345	1csc	*	MALMALTOSE	V - 374
1csc_*_345	1csc	*	CMCCARBOXYMETHYL COENZYME *A	D - 375
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	L - 361
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	Q - 364
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	K - 366
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	A - 367
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	K - 368
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	N - 369
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	N - 373
1csh_*_345	1csh	*	OAAOXALOACETATE ION	N - 373
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	V - 374
1csh_*_345	1csh	*	OAAOXALOACETATE ION	V - 374
1csh_*_345	1csh	*	AMXAMIDOCARBOXYMETHYLDETHIA COENZYME *A	D - 375
1csh_*_345	1csh	*	OAAOXALOACETATE ION	D - 375
2cts_*_345	2cts	*	COACOENZYME A	L - 361
2cts_*_345	2cts	*	COACOENZYME A	Q - 364
2cts_*_345	2cts	*	COACOENZYME A	K - 366
2cts_*_345	2cts	*	COACOENZYME A	A - 367
2cts_*_345	2cts	*	COACOENZYME A	K - 368
2cts_*_345	2cts	*	COACOENZYME A	N - 369
2cts_*_345	2cts	*	COACOENZYME A	N - 373
2cts_*_345	2cts	*	CITCITRIC ACID	N - 373
2cts_*_345	2cts	*	CITCITRIC ACID	V - 374
2cts_*_345	2cts	*	COACOENZYME A	D - 375
2cts_*_345	2cts	*	CITCITRIC ACID	D - 375

Clusters included in this Subclass

CLUSTER: HH.10.77