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Information on SUBCLASS 9.21.1
Subclass Accession number: 5089
Subclass: 9.21.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 5.3 (>50 %)  5.3.1 (>50 %)  5.3.1.5
GO : GO:0005083 (>75 %)  GO:0005085 (>75 %)  GO:0005086 (>75 %)  GO:0030695 (>75 %)  
SCOP : 48370 (>75 %)  48425 (>75 %)  48426 (>75 %)  51658 (>50 %)  51665 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 61.9 +/- -8.3
Average RMSD (Å) : 0.567 +/- 0.208

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XHNPpVpppMXhp
(φψ)-conformation: aapaapabpppaa
Pattern: [AT][D][ST][CV][FY][IV][L][S][Y][S][IV][I][M][L][N][T][D]x[H][N][P][NQ][V][KR][DE][HK][M][GST][FL][DE][DR][FY][SV][AGN]x
Conservation:-0.9541.178-0.673-0.7580.456-0.2220.0490.0491.7420.049-0.2320.0490.6130.0491.1780.6131.178-1.5762.3071.1781.742-0.6700.049-0.2280.004-0.5740.613-1.394-0.743-0.109-1.1850.501-1.634-1.457-1.185
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ku1_A_6951ku1   A695729ADSVFILSYSIIMLNTDLHNPQVKEHMSFEDYSGNHHHHHHHHHHHHHHHHHHT-TT-SS---HHHHHHHaaaaaaaaaaaaaaaaaaabaaxabppxaaaaaaa
1r8s_E_1821r8s   E182216TDTCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMHHHHHHHHHHHHHHHHHHH-TT--S---HHHHHHHaaaaaaaaaaaaaaaaaaaxaaxabpxxaaaaaaa
1re0_B_2481re0   B248282ADSVFVLSYSIIMLNTDSHNPQVKDHMTFDDYSNNHHHHHHHHHHHHHHHHHHH-TT--S---HHHHHHHaaaaaaaaaaaaaaaaaaaxaaxabxxxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE Y - 256
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE I - 259
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE M - 260
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE L - 261
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE T - 263
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE D - 264
1re0_B_2481re0   B     AFB1,6,7,8,9,11A,12,13,14,14A-DECAHYDRO-1,13-DIHYDROXY-6-METHYL-4H-CYCLOPENT[F]OXACYCLOTRIDECIN-4-ONE V - 270

Clusters included in this Subclass
CLUSTER: HH.9.78