ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.27.1

Subclass Accession number: 5095
Subclass: 9.27.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
SCOP : 56573 (>75 %) 56574 (>75 %) 56575 (>75 %)

Number of loops: 3

Average sequence ID (%) : 52.1 +/- 2.9
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry

d (Å): 19

delta (°): 135-180

theta (°): 90-135

rho (°): 315-360

Consensus Sequence:	XXXPpXNhhhSPh
(φψ)-conformation:	aabaappbbbbaa

Pattern:	[F]	[AT]	[FV]	[DS]	[L]	[FY]	[KR]	[AQ]	[L]	[ANV]	x	[AKS]	[AD]	[P]	[DST]	[GKQ]	[N]	[IV]	[FI]	[FI]	[S]	[P]	[LV]	[S]	[I]	[S]	x	[AS]	[L]	[A]	[FM]	[IL]
Conservation:	1.623	-0.575	-0.538	-0.268	0.452	0.987	0.189	-0.865	0.452	-1.631	-1.696	-1.045	-1.049	2.209	-0.915	-1.240	1.623	0.169	-0.268	-0.256	0.452	2.209	-0.386	0.452	0.452	0.452	-1.110	-0.386	0.452	0.452	-0.280	-0.112

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1as4_A_26	1as4	A	33	64	FAFSLYKQLVLKAPDKNVIFSPLSISTALAFL	HHHHHHHHHHHH-TTS-----HHHHHHHHHHH	aaaaaaaaaaaabaaxxbbbbaaaaaaaaaaa
1hle_A_24	1hle	A	33	64	FAVDLFRALNESDPTGNIFISPLSISSALAMI	HHHHHHHHHHHH-SSS-----HHHHHHHHHHH	aaaaaaaaaaaabaaxxbbbbaaaaaaaaaaa
1lq8_A_29	1lq8	A	29	60	FTFDLYRALASAAPSQNIFFSPVSISMSLAML	HHHHHHHHHHHHSTTS-----HHHHHHHHHHH	aaaaaaaaaaaabaabxbbbbaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass