Information on SUBCLASS 10.7.1 |
Subclass Accession number: 5104
Subclass: 10.7.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.18 (>75 %) 3.2 (>75 %) 3.2.2 (>75 %) 3.2.2.22 GO : GO:0004364 (>75 %) GO:0016765 (>75 %) GO:0016798 (>75 %) GO:0016799 (>75 %) GO:0030597 (>75 %) SCOP : 47615 (>75 %) 47616 (>75 %) 47617 (>75 %) 56370 (>75 %) 56371 (>75 %) 56372 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 43.3 +/- 23.9 Average RMSD (Å) : 0.425 +/- 0.126 Consensus geometry
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Consensus Sequence: | ppXKhhhGDpFThA |
(φψ)-conformation: | aababaaeabpbaa |
Pattern: | [LV] | [ADP] | x | x | [AEKL] | [AEN] | [KQ] | [L] | [AK] | [KS] | [KV] | [FL] | x | [VY] | [IY] | [EN] | [AD] | x | [L] | [AKST] | [EKR] | x | [K] | [CY] | [LV] | [AC] | [G] | [DE] | x | [FL] | [ST] | [LV] | [AT] | [D] | [AL] |
Conservation: | 0.144 | -0.873 | -0.893 | -1.213 | -1.421 | -0.836 | 0.578 | 1.072 | -0.369 | 0.100 | -0.694 | 0.015 | -0.779 | -0.204 | 0.322 | 0.281 | -0.604 | -1.159 | 1.072 | -0.839 | 0.105 | -1.670 | 1.737 | 0.463 | 0.144 | 0.285 | 2.402 | 1.167 | -1.338 | 0.538 | 0.517 | 0.144 | -0.023 | 2.402 | -0.572 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aw9_*_130 | 1aw9 | - | 133 | 167 | VDKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADA | HHHHHHHHHHHHHHHHHHHHH-SBTTBSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeabxbaaaa |
1axd_A_129 | 1axd | A | 132 | 166 | VDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADL | HHHHHHHHHHHHHHHHHHHHH-SSSSSSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeabxbaaaa |
1gnw_A_133 | 1gnw | A | 136 | 170 | VAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDL | HHHHHHHHHHHHHHHHHHHTT-SSSSSSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeabxbaaaa |
1pmt_*_122 | 1pmt | - | 122 | 156 | LPVVKNKLKSKFVYINDVLSKQKCVCGDHFTVADA | HHHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHH | aaaaaaaaaaaaaaaaaaaaababaaeaxxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | E - 138 |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | K - 142 |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | H - 150 |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | L - 151 |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | A - 152 |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | R - 153 |
1aw9_*_130 | 1aw9 | * | CDCADMIUM ION | N - 154 |
1gnw_A_133 | 1gnw | A | GTXS-HEXYLGLUTATHIONE | K - 142 |
1pmt_*_122 | 1pmt | * | GTTGLUTATHIONE | Y - 157 |
Clusters included in this Subclass |
CLUSTER: HH.11.25 |