Information on SUBCLASS 10.19.1 |
Subclass Accession number: 5116
Subclass: 10.19.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005083 (>75 %) GO:0005085 (>75 %) GO:0005086 (>75 %) GO:0030695 (>75 %) SCOP : 48370 (>75 %) 48425 (>75 %) 48426 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 39.8 +/- 16.6 Average RMSD (Å) : 0.367 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXpGhXpXcDhPXX |
(φψ)-conformation: | aaplablgbbppaa |
Pattern: | [FL] | [DE] | [DR] | [FY] | [SV] | [AGN] | x | x | [KR] | [G] | [CI] | [CNY] | [EN] | x | [GK] | [D] | [FL] | [P] | [EFR] | [EW] | [LY] | [L] | [DHR] | [KNR] | [ILV] | [Y] | [CDT] | [S] | [I] | [KR] | [DNV] |
Conservation: | -0.134 | 0.429 | -0.580 | 1.066 | -1.058 | -0.918 | -0.580 | -1.136 | 0.354 | 1.690 | 0.166 | -1.167 | -0.037 | -0.233 | -0.674 | 1.690 | -0.134 | 2.249 | -1.415 | 0.100 | -0.215 | 0.572 | -0.856 | -0.421 | -0.173 | 2.249 | -1.043 | 0.572 | 0.572 | 0.354 | -1.291 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ku1_A_723 | 1ku1 | A | 723 | 753 | FEDYSGNLKGCCNHKDFPFWYLDRVYCSIRD | HHHHHHHTTT-BTTB---HHHHHHHHHHHHH | aaaaaaaapvablvbxxxaaaaaaaaaaaaa |
1r8s_E_210 | 1r8s | E | 210 | 240 | LERFVAMNRGINEGGDLPEELLRNLYDSIRN | HHHHHHHTTTTBTTB---HHHHHHHHHHHHH | aaaaaaaapvaxlgbbxxaaaaaaaaaaaaa |
1re0_B_276 | 1re0 | B | 276 | 306 | FDDYSNNLRGCYNGKDFPRWYLHKIYTSIKV | HHHHHHHTTTTBTTB---HHHHHHHHHHHHH | aaaaaaaapvablgbbxxaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1r8s_E_210 | 1r8s | E | FMTFORMIC ACID | R - 218 |
1r8s_E_210 | 1r8s | E | FMTFORMIC ACID | G - 219 |
1r8s_E_210 | 1r8s | E | FMTFORMIC ACID | N - 233 |
1r8s_E_210 | 1r8s | E | FMTFORMIC ACID | S - 237 |
Clusters included in this Subclass |
CLUSTER: HH.10.53 |