Logo
Information on SUBCLASS 11.6.1
Subclass Accession number: 5126
Subclass: 11.6.1 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.5 (>75 %)  2.5.1 (>75 %)  2.5.1.183.1 (>50 %)  3.1.4 (>50 %)  3.1.4.3
GO : GO:0005509 (>75 %)  GO:0008081 (>75 %)  GO:0008270 (>75 %)  GO:0016298 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0042578 (>75 %)  GO:0046914 (>75 %)  
SCOP : 47615 (>75 %)  47616 (>75 %)  47617 (>75 %)  48536 (>75 %)  48537 (>75 %)  48538 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 67.7 +/- -19.7
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 29 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: pYphcTXGXcTcpXF
(φψ)-conformation: aapbabagbbaapaa
Pattern: [G][H][V][K][F][E][T][FY][A][E][DE][R][K][DE][QT][Y][KR][IL][DN][T][TV][G][CSY][KN][T][DN][DE][AD][F][Y][AKS]
Conservation:0.9742.154-0.2060.3840.9740.3840.3840.217-0.2060.384-0.3740.3840.384-0.291-1.3671.564-0.492-0.790-0.4850.384-1.1700.974-1.911-0.9570.384-0.485-0.291-1.7240.9741.564-1.714
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ca1_*_1471ca1   -147177GHVKFETFAEERKEQYKINTVGCKTNEDFYAHHHHHHHHHHHHGGGG--S--SS-TTSHHHHaaaaaaaaaaaaaaaaxbabagbxaaxaaaa
1kho_A_1471kho   A147177GHVKFETFAEDRKDQYKINTTGSKTNDAFYSHHHHHHHHHHHTGGGG--S--S--TTSHHHHaaaaaaaaaaaaaaaaxbabavbbaaxaaaa
1olp_A_1461olp   A147177GHVKFETYAEERKDTYRLDTTGYNTDDAFYKHHHHHHHHHHHHGGGG--S--SS-TTSHHHHaaaaaaaaaaaaaaaaxxabagbbaaxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ca1_*_1471ca1   *     CDCADMIUM ION H - 148
1ca1_*_1471ca1   *     ZNZINC ION E - 152
1ca1_*_1471ca1   *     CDCADMIUM ION E - 152
1ca1_*_1471ca1   *     CDCADMIUM ION T - 153
1ca1_*_1471ca1   *     CDCADMIUM ION F - 154
1ca1_*_1471ca1   *     CDCADMIUM ION E - 157
1ca1_*_1471ca1   *     CDCADMIUM ION V - 167
1ca1_*_1471ca1   *     CDCADMIUM ION G - 168
1ca1_*_1471ca1   *     CDCADMIUM ION C - 169
1ca1_*_1471ca1   *     CDCADMIUM ION K - 170
1ca1_*_1471ca1   *     CDCADMIUM ION E - 173
1ca1_*_1471ca1   *     CDCADMIUM ION D - 174
1ca1_*_1471ca1   *     CDCADMIUM ION F - 175
1ca1_*_1471ca1   *     CDCADMIUM ION D - 178
1ca1_*_1471ca1   *     CDCADMIUM ION L - 180
1ca1_*_1471ca1   *     CDCADMIUM ION K - 181
1kho_A_1471kho   A     ZNZINC ION H - 148
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ca1_*_1471ca1   * C11CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.E - 157
1ca1_*_1471ca1   * CD4CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.G - 168
1ca1_*_1471ca1   * CD4CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.C - 169
1ca1_*_1471ca1   * CD5CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.E - 173
1ca1_*_1471ca1   * CD7CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.D - 174
1ca1_*_1471ca1   * CD7CD FROM CRYSTALLISATION BUFFER AT PROTEIN SURFACE.D - 178
1olp_A_1461olp   A BC1ZN BINDING SITE FOR CHAIN AH - 148
1olp_A_1461olp   A BC1ZN BINDING SITE FOR CHAIN AE - 152

Clusters included in this Subclass
CLUSTER: HH.15.5