Information on SUBCLASS 11.6.1 |
Subclass Accession number: 5126
Subclass: 11.6.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.183.1 (>50 %) 3.1.4 (>50 %) 3.1.4.3 GO : GO:0005509 (>75 %) GO:0008081 (>75 %) GO:0008270 (>75 %) GO:0016298 (>75 %) GO:0016788 (>75 %) GO:0016789 (>75 %) GO:0042578 (>75 %) GO:0046914 (>75 %) SCOP : 47615 (>75 %) 47616 (>75 %) 47617 (>75 %) 48536 (>75 %) 48537 (>75 %) 48538 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 67.7 +/- -19.7 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
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Consensus Sequence: | pYphcTXGXcTcpXF |
(φψ)-conformation: | aapbabagbbaapaa |
Pattern: | [G] | [H] | [V] | [K] | [F] | [E] | [T] | [FY] | [A] | [E] | [DE] | [R] | [K] | [DE] | [QT] | [Y] | [KR] | [IL] | [DN] | [T] | [TV] | [G] | [CSY] | [KN] | [T] | [DN] | [DE] | [AD] | [F] | [Y] | [AKS] |
Conservation: | 0.974 | 2.154 | -0.206 | 0.384 | 0.974 | 0.384 | 0.384 | 0.217 | -0.206 | 0.384 | -0.374 | 0.384 | 0.384 | -0.291 | -1.367 | 1.564 | -0.492 | -0.790 | -0.485 | 0.384 | -1.170 | 0.974 | -1.911 | -0.957 | 0.384 | -0.485 | -0.291 | -1.724 | 0.974 | 1.564 | -1.714 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ca1_*_147 | 1ca1 | - | 147 | 177 | GHVKFETFAEERKEQYKINTVGCKTNEDFYA | HHHHHHHHHHHHGGGG--S--SS-TTSHHHH | aaaaaaaaaaaaaaaaxbabagbxaaxaaaa |
1kho_A_147 | 1kho | A | 147 | 177 | GHVKFETFAEDRKDQYKINTTGSKTNDAFYS | HHHHHHHHHHHTGGGG--S--S--TTSHHHH | aaaaaaaaaaaaaaaaxbabavbbaaxaaaa |
1olp_A_146 | 1olp | A | 147 | 177 | GHVKFETYAEERKDTYRLDTTGYNTDDAFYK | HHHHHHHHHHHHGGGG--S--SS-TTSHHHH | aaaaaaaaaaaaaaaaxxabagbbaaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | H - 148 |
1ca1_*_147 | 1ca1 | * | ZNZINC ION | E - 152 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | E - 152 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | T - 153 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | F - 154 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | E - 157 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | V - 167 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | G - 168 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | C - 169 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | K - 170 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | E - 173 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | D - 174 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | F - 175 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | D - 178 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | L - 180 |
1ca1_*_147 | 1ca1 | * | CDCADMIUM ION | K - 181 |
1kho_A_147 | 1kho | A | ZNZINC ION | H - 148 |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HH.15.5 |