ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.9.1

Subclass Accession number: 5129
Subclass: 11.9.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.12 (>50 %)  3.1 (>75 %)  3.1.1 (>75 %)  3.1.1.3
GO : GO:0004091 (>75 %)  GO:0004771 (>50 %)  GO:0008901 (>75 %)  GO:0016151 (>75 %)  GO:0016695 (>75 %)  GO:0016699 (>75 %)  GO:0016788 (>75 %)  GO:0016789 (>75 %)  GO:0046914 (>75 %)
SCOP : 53473 (>75 %)  53474 (>75 %)  53475 (>75 %)  56761 (>75 %)  56762 (>75 %)  56763 (>75 %)

Number of loops: 3

Average sequence ID (%) : 59.0 +/- -4.3
Average RMSD (Å) : 0.300 +/- 0.100

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	XLhGXPVhDhKpPVp
(φψ)-conformation:	aapgppbabaabpaa

Pattern:	[AP]	[AIV]	[E]	[AE]	[AS]	[L]	[IV]	[G]	[TV]	[P]	[V]	[AP]	[D]	[AIP]	[K]	[NR]	[P]	[V]	[EN]	[IV]	[GL]	[R]	[LT]	[IV]	[HR]	[S]
Conservation:	-0.508	-1.010	0.819	-1.038	-0.559	0.252	-0.022	1.387	-0.697	1.955	0.252	-0.812	1.387	-1.704	0.819	-0.471	1.955	0.252	-0.471	-0.029	-1.767	0.819	-0.978	-0.022	-0.063	0.252

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cc1_L_463	1cc1	L	463	488	PIEEALIGVPVPDIKNPVNVGRLVRS	HHHHHHTT-B-S-TTS-HHHHHHHHH	aaaaaapgxwbabaabaaaaaaaaaa
1e3d_B_507	1e3d	B	507	532	AAEAALVGTPVADPKRPVEILRTIHS	HHHHHHTT-B-S-TTS-HHHHHHHHH	aaaaaapvxxbabaabwaaaaaaaaa
1ubl_L_517	1ubl	L	517	542	PVEASLIGTPVADAKRPVEILRTVHS	HHHHHHTT-B-S-TTS-HHHHHHHHH	aaaaaaxvxxbabaabxaaaaaaaaa

Clusters included in this Subclass