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PDB code:

Information on SUBCLASS 13.1.1

Subclass Accession number: 5147 Subclass: 13.1.1 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 28 Average sequence ID (%) : 29.0 +/- 22.4 Average RMSD (Å) : 0.543 +/- 0.290 Consensus geometry d (Å): 15 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1awc_B_117	1awc	B	119	143	VVELLIKYGADVHTQSKFCKTAFDI	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavpxaaxxxaavbxaaaa
1awc_B_51	1awc	B	53	77	TTEVLLRAGVSRDARTKVDRTPLHM	HHHHHHTTT--TT---TT---HHHH	aaaaaaaavxxaaxbxaavxbaaaa
1awc_B_84	1awc	B	86	110	IVEVLLKHGADVNAKDMLKMTALHW	HHHHHHTTT--TT---TTS--HHHH	aaaaaaaavxxaapbxaalbbaaaa
1bd8_*_21	1bd8	-	24	48	VRRLLHRELVHPDALNRFGKTALQV	HHHHHHTT---TT---TTS--HHHH	aaaaaaaavxxaapxxaavbxaaaa
1bd8_*_54	1bd8	-	56	80	IALELLKQGASPNVQDTSGTSPVHD	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaagpxaapbxaavxbaaaa
1bd8_*_87	1bd8	-	89	113	TLKVLVEHGADVNVPDGTGALPIHL	HHHHHHHTT--S----TTS--HHHH	aaaaaaaavxxaaxxxaavxxaaaa
1blx_B_21	1blx	B	24	48	VRRLLHRELVHPDALNRFGKTALQV	HHHHHHTS---TT---TTS--HHHH	aaaaaaaalxxaapxxaavbxaaaa
1blx_B_54	1blx	B	56	80	VALELLKQGASPNVQDASGTSPVHD	HHHHHHHTT--TT---TT---HHHH	aaaaaaaagxxaapbxaagxbaaaa
1blx_B_87	1blx	B	89	113	TLKVLVEHGADVNALDSTGSLPIHL	HHHHHHHTT--TT---TT---HHHH	aaaaaaaavxxaaxbxaavxxaaaa
1dcq_A_462	1dcq	A	464	488	CLKLLLRGKASIEIANESGETPLDI	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavxxaaxbxaavxbaaaa
1ihb_A_50	1ihb	A	52	76	IARRLLLRGANPDLKDRTGFAVIHD	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaagxxaaxbxaavxbaaaa
1ihb_A_83	1ihb	A	85	109	TLQTLLEFQADVNIEDNEGNLPLHL	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavxxaaxbxaavxxaaaa
1ixv_A_120	1ixv	A	122	146	VSQFLIENGASVRIKDKFNQIPLHR	HHHHHHHTT--S----TTS--HHHH	aaaaaaaagxxaaxxxaavbbaaaa
1ixv_A_153	1ixv	A	156	180	IELLCGLGKSAVNWQDKQGWTPLFH	HHHHHTTT---S----TTS--HHHH	aaaaaaaalpxaaxxxaavxxaaaa
1k1a_A_177	1k1a	A	179	203	VVRLLVTAGASPMALDRHGQTAAHL	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaagxxaapxxaavxxaaaa
1k1a_A_281	1k1a	A	283	307	MVQLLLQHGANVNAQMYSGSSALHS	HHHHHHHTT--TT-B-TTS-BHHHH	aaaaaaaavxxaapbxaavxbaaaa
1ot8_A_133	1ot8	A	133	157	MVEDLITADADINAADNSGKTALHW	HHHHHHHTT--TT-B-TTS-BHHHH	aaaaaaaavxxaaxbxaavxxaaaa
1ot8_A_164	1ot8	A	166	190	AVNILLMHHANRDAQDDKDETPLFL	HHHHHHHTT--TT---TT---HHHH	aaaaaaaavxxaapbxaalxxaaaa
1ot8_A_197	1ot8	A	199	223	ASKALLDNFANREITDHMDRLPRDV	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavxxaaxxxaavxxaaaa
1ot8_A_64	1ot8	A	66	90	AAKRLLDAGADANSQDNTGRTPLHA	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavpxaaxbxaavxbaaaa
1oy3_D_107	1oy3	D	109	133	TVEKLYAAGAGVLVAERGGHTALHL	HHHHHHHTT--SS---TTS--HHHH	aaaaaaaagxxaapbxaavxxaaaa
1oy3_D_254	1oy3	D	256	280	VLELLLKAGADPTARMYGGRTPLGS	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavxxaaxbxaagxbaaaa
1sw6_A_331	1sw6	A	333	357	LVKHLVKHGSNRLYGDNMGESCLVK	HHHHHHHTT--TTB--TT---HHHH	aaaaaaaagpxaaxxxaavxxaaaa
1uoh_A_119	1uoh	A	121	145	IAVMLLEGGANPDAKDHYEATAMHR	HHHHHHHTT--TT---TTS--HHHH	aaaaaaaavpxaapbxaavbbaaaa
1uoh_A_152	1uoh	A	154	178	MIHILLYYKASTNIQDTEGNTPLHL	HHHHHHHTT--S----TT---HHHH	aaaaaaaavxxaaxxxaavxxaaaa
1uoh_A_185	1uoh	A	187	211	EAKLLVSQGASIYIENKEEKTPLQV	HHHHHHHTT--S----TTS--HHHH	aaaaaaaavxxaaxxxaavbxaaaa
1uoh_A_53	1uoh	A	55	79	IVEFLLQLGVPVNDKDDAGWSPLHI	HHHHHHHHT--S----TT---HHHH	aaaaaaaagxwaaxbxaavxxaaaa
1uoh_A_86	1uoh	A	88	112	IVKALLGKGAQVNAVNQNGCTPLHY	HHHHHHHTT--TT---TT---HHHH	aaaaaaaavpxaaxbxaavxxaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1ot8_A_133	1ot8	A	MGMAGNESIUM ION	E - 135
1ot8_A_133	1ot8	A	MGMAGNESIUM ION	D - 136

Clusters included in this Subclass

CLUSTER: HH.13.0

CLUSTER: HH.13.24

CLUSTER: HH.14.1

CLUSTER: HH.14.24

CLUSTER: HH.15.0

CLUSTER: HH.16.4

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