ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 17.2.1

Subclass Accession number: 5172
Subclass: 17.2.1

Type: HH alpha-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.1 (>75 %)  1.1.99 (>75 %)  1.1.99.8 1.3 (>75 %)  1.3.99 (>75 %)
GO : GO:0003995 (>75 %)  GO:0005509 (>75 %)  GO:0016614 (>75 %)  GO:0016627 (>75 %)  GO:0018468 (>75 %)
SCOP : 50997 (>75 %)  50998 (>75 %)  50999 (>75 %)  56644 (>75 %)  56645 (>75 %)  56646 (>75 %)

Number of loops: 3

Average sequence ID (%) : 62.7 +/- -11.4
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 90-135

rho (°): 0-45

Consensus Sequence:	phXLApDFNXXNPHYGQXcLG
(φψ)-conformation:	aalbpaaplaabaaaeaplaa

Pattern:	[D]	[DEK]	[DES]	[LV]	x	[L]	[A]	[EKS]	[D]	[F]	[N]	x	x	[N]	[P]	[H]	[Y]	[G]	[Q]	[FK]	[GN]	[L]	[G]	[LT]	[EGK]
Conservation:	0.877	-0.788	-0.837	-0.652	-1.219	-0.004	-0.004	-0.984	0.877	0.877	0.877	-1.375	-1.277	0.877	1.318	1.759	1.318	0.877	0.437	-1.210	-0.412	-0.004	0.877	-0.931	-1.277

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1g72_A_198	1g72	A	198	222	DDSVRLAKDFNSANPHYGQFGLGTK	HHHHTB-TTTTTT-GGG--SSHHHH	aaaavbxaaplaabaaaeaxvaaaa
1h4i_A_204	1h4i	A	204	228	DKDLLLASDFNIKNPHYGQKGLGTG	HHHHTB-TTTTSS-GGG--TTHHHH	aaaalxxaaplaabaaaeFxvaaaa
1lrw_A_204	1lrw	A	204	228	DEELLLAEDFNAPNPHYGQKNLGLE	HHHHTB-TTTT-S-GGG--TTHHHH	aaaalbxaaplaabaaaeaxvaaaa

Clusters included in this Subclass